Federated and distributed learning applications for electronic health records and structured medical data: a scoping review

被引:6
|
作者
Li, Siqi [1 ]
Liu, Pinyan [1 ]
Nascimento, Gustavo G. [2 ,3 ]
Wang, Xinru [1 ]
Leite, Fabio Renato Manzolli [2 ,3 ]
Chakraborty, Bibhas [1 ,4 ,5 ,6 ]
Hong, Chuan [6 ]
Ning, Yilin [1 ]
Xie, Feng [1 ,4 ]
Teo, Zhen Ling [7 ]
Ting, Daniel Shu Wei [1 ,7 ]
Haddadi, Hamed [8 ]
Ong, Marcus Eng Hock [4 ,9 ]
Peres, Marco Aurelio [2 ,3 ,4 ]
Liu, Nan [1 ,4 ,10 ,11 ]
机构
[1] Duke NUS Med Sch, Ctr Quantitat Med, Singapore 169857, Singapore
[2] Natl Dent Ctr Singapore, Natl Dent Res Inst Singapore, Singapore 168938, Singapore
[3] Duke NUS Med Sch, Oral Hlth Acad Clin Programme, Singapore 169857, Singapore
[4] Duke NUS Med Sch, Programme Hlth Serv & Syst Res, Singapore 169857, Singapore
[5] Natl Univ Singapore, Dept Stat & Data Sci, Singapore 117546, Singapore
[6] Duke Univ, Dept Biostat & Bioinformat, Durham, NC 27708 USA
[7] Singapore Natl Eye Ctr, Singapore Eye Res Inst, Singapore 168751, Singapore
[8] Imperial Coll London, Dept Comp, London SW7 2AZ, England
[9] Singapore Gen Hosp, Dept Emergency Med, Singapore 169608, Singapore
[10] Natl Univ Singapore, Inst Data Sci, Singapore 117602, Singapore
[11] Duke NUS Med Sch, Ctr Quantitat Med, 8 Coll Rd, Singapore 169857, Singapore
关键词
clinical decision-making; distributed algorithms; distributed learning; electronic health records; federated learning; CLASSIFICATION; PROFILES;
D O I
10.1093/jamia/ocad170
中图分类号
TP [自动化技术、计算机技术];
学科分类号
0812 ;
摘要
Objectives: Federated learning (FL) has gained popularity in clinical research in recent years to facilitate privacy-preserving collaboration. Structured data, one of the most prevalent forms of clinical data, has experienced significant growth in volume concurrently, notably with the widespread adoption of electronic health records in clinical practice. This review examines FL applications on structured medical data, identifies contemporary limitations, and discusses potential innovations. Materials and methods: We searched 5 databases, SCOPUS, MEDLINE, Web of Science, Embase, and CINAHL, to identify articles that applied FL to structured medical data and reported results following the PRISMA guidelines. Each selected publication was evaluated from 3 primary perspectives, including data quality, modeling strategies, and FL frameworks. Results: Out of the 1193 papers screened, 34 met the inclusion criteria, with each article consisting of one or more studies that used FL to handle structured clinical/medical data. Of these, 24 utilized data acquired from electronic health records, with clinical predictions and association studies being the most common clinical research tasks that FL was applied to. Only one article exclusively explored the vertical FL setting, while the remaining 33 explored the horizontal FL setting, with only 14 discussing comparisons between single-site (local) and FL (global) analysis. Conclusions: The existing FL applications on structured medical data lack sufficient evaluations of clinically meaningful benefits, particularly when compared to single-site analyses. Therefore, it is crucial for future FL applications to prioritize clinical motivations and develop designs and methodologies that can effectively support and aid clinical practice and research.
引用
收藏
页码:2041 / 2049
页数:9
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