Asia Pacific Sporolithon (Corallinophycidae, Rhodophyta) species revised based on DNA sequencing of type specimens and including S. crypticum sp. nov., S. immotum sp. nov. and S. nodosum sp. nov.

被引:2
|
作者
Gabrielson, Paul W. [1 ]
Hughey, Jeffery R. [2 ]
Pena, Viviana [3 ,4 ]
Richards, Joseph L. [5 ]
Saunders, Gary W. [6 ]
Twist, Brenton [7 ,8 ]
Farr, Tracy [8 ]
Nelson, Wendy A. [8 ,9 ]
机构
[1] Univ North Carolina Chapel Hill, Coker Hall CB 3280, Chapel Hill, NC 27599 USA
[2] Hartnell Coll, Sci & Engn, 411 Cent Ave, Salinas, CA 93901 USA
[3] Campus A Zapateira S-N, La Coruna 15071, Spain
[4] Univ Antilles, Sorbonne Univ, Inst Systemat Evolut Biodiversite ISYEB, Museum Natl Hist Nat,CNRS,EPHE, 57 Rue Cuvier,CP 39, F-75005 Paris, France
[5] Univ Louisiana Lafayette, Lafayette, LA 70504 USA
[6] Univ New Brunswick, Ctr Environm & Mol Algal Res, Fredericton, NB E3B 5A3, Canada
[7] Univ British Columbia, 3200-6270 Univ Blvd, Vancouver, BC V6T 1Z4, Canada
[8] Natl Inst Water & Atmospher Res, Private Bag 14901, Wellington 6241, New Zealand
[9] Univ Auckland, Sch Biol Sci, Private Bag 92019, Auckland 1142, New Zealand
基金
加拿大自然科学与工程研究理事会; 加拿大创新基金会;
关键词
psbA; rbcL; Sanger sequencing; Sporolithales; RED ALGAE FLORIDEOPHYCEAE; APPLYING AVAILABLE NAMES; 1ST REPORT; SPERMONDE ARCHIPELAGO; RHODOLITH BEDS; CORALLINALES; GENUS; ATLANTIC; CHECKLIST; PURPOSE;
D O I
10.1080/00318884.2023.2225309
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
To address the taxonomic uncertainty of Sporolithon species named in the early to mid-20th century, targeted PCR sequencing was performed on eight historical type specimens and on recently collected specimens. Six type specimens amplified for the rbcL gene and were Sanger sequenced yielding sequences ranging in length from 118 to 280 base pairs (bp). One, S. australasicum, failed to amplify and another, S. howei, was amplified for the psbA gene yielding a sequence 544 bp in length. The 118 bp long rbcL sequence of the lectotype of S. crassiramosum showed that it is a later, heterotypic synonym of S. molle. The rbcL sequences of type specimens of S. episoredion, S. schmidtii, S. sibogae and S. timorense ranged from 118 to 228 bp, and each is a distinct species. The 544 bp long psbA sequence of S. howei is also unique. The 280 bp long rbcL sequence of the lectotype of S. durum did not match any sequence with that name in any public repository, including the previously published complete plastome and mitogenome sequences. However, it was identical in sequence to a specimen in GenBank from the southern coast of Western Australia as well as several other sequences generated from field-collected specimens from the states of South Australia and Western Australia. The rhodolith specimens from New Zealand previously called S. durum are S. nodosum sp. nov. The species is endemic to New Zealand. The epilithic specimens from New Zealand previously called S. durum are S. immotum sp. nov., which is also found along the southeastern coast of Australia. Sporolithon crypticum sp. nov. is described from the southern coast of Western Australia. RAxML and Bayesian phylogenetic analyses of Sporolithon psbA and rbcL sequences are congruent between the two plastid encoded genes. DNA sequencing of type specimens of species of corallines is demonstrated to be the only reliable method to correctly apply names.
引用
收藏
页码:593 / 607
页数:15
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