Genome-wide identification and expression analysis of BZR gene family and associated responses to abiotic stresses in cucumber (Cucumis sativus L.)

被引:8
|
作者
Luo, Shilei [1 ,2 ]
Zhang, Guobin [2 ]
Zhang, Zeyu [2 ]
Wan, Zilong [2 ]
Liu, Zeci [2 ]
Lv, Jian [2 ]
Yu, Jihua [1 ,2 ]
机构
[1] Gansu Agr Univ, State Key Lab Aridland Crop Sci, Lanzhou, Peoples R China
[2] Gansu Agr Univ, Coll Hort, Lanzhou, Peoples R China
关键词
BZR transcription factor; Genome-wide expression analysis; Abiotic stress; BRASSINOSTEROID SIGNAL-TRANSDUCTION; TRANSCRIPTION FACTOR FAMILY; PLANT-GROWTH; ARABIDOPSIS; ATTRIBUTES; PROTEINS; NETWORK; ROLES;
D O I
10.1186/s12870-023-04216-9
中图分类号
Q94 [植物学];
学科分类号
071001 ;
摘要
BackgroundBRASSINAZOLE-RESISTANT (BZR) is a class of specific transcription factor (TFs) involved in brassinosteroid (BR) signal transduction. The regulatory mechanism of target genes mediated by BZR has become one of the key research areas in plant BR signaling networks. However, the functions of the BZR gene family in cucumber have not been well characterized.ResultsIn this study, six CsBZR gene family members were identified by analyzing the conserved domain of BES1 N in the cucumber genome. The size of CsBZR proteins ranges from 311 to 698 amino acids and are mostly located in the nucleus. Phylogenetic analysis divided CsBZR genes into three subgroups. The gene structure and conserved domain showed that the BZR genes domain in the same group was conserved. Cis-acting element analysis showed that cucumber BZR genes were mainly involved in hormone response, stress response and growth regulation. The qRT-PCR results also confirmed CsBZR response to hormones and abiotic stress.ConclusionCollectively, the CsBZR gene is involved in regulating cucumber growth and development, particularly in hormone response and response to abiotic stress. These findings provide valuable information for understanding the structure and expression patterns of BZR genes.
引用
收藏
页数:13
相关论文
共 50 条
  • [1] Genome-wide identification and expression analysis of BZR gene family and associated responses to abiotic stresses in cucumber (Cucumis sativus L.)
    Shilei Luo
    Guobin Zhang
    Zeyu Zhang
    Zilong Wan
    Zeci Liu
    Jian Lv
    Jihua Yu
    [J]. BMC Plant Biology, 23
  • [2] Genome-Wide Identification and Expression Analysis of SnRK Gene Family under Abiotic Stress in Cucumber (Cucumis sativus L.)
    Luo, Yanyan
    Niu, Yuan
    Gao, Rong
    Wang, Chunlei
    Liao, Weibiao
    [J]. AGRONOMY-BASEL, 2022, 12 (07):
  • [3] Genome-Wide Identification of YABBY Gene Family in Cucurbitaceae and Expression Analysis in Cucumber (Cucumis sativus L.)
    Yin, Shuai
    Li, Sen
    Gao, Yiming
    Bartholomew, Ezra S.
    Wang, Ruijia
    Yang, Hua
    Liu, Chang
    Chen, Xiaofeng
    Wang, Ying
    Liu, Xingwang
    Ren, Huazhong
    [J]. GENES, 2022, 13 (03)
  • [4] Genome-Wide Identification and Abiotic Stress Expression Analysis of CKX and IPT Family Genes in Cucumber (Cucumis sativus L.)
    Xu, Yang
    Ran, Shengxiang
    Li, Shuhao
    Lu, Junyang
    Huang, Weiqun
    Zheng, Jingyuan
    Hou, Maomao
    Zhong, Fenglin
    [J]. PLANTS-BASEL, 2024, 13 (03):
  • [5] Genome-wide characterization, phylogenetic and expression analysis of Histone gene family in cucumber (Cucumis sativus L.)
    Wang, Yi
    Li, Yangang
    Zhou, Fang
    Zhang, Lu
    Gong, Jianlei
    Cheng, Chunyan
    Chen, Jinfeng
    Lou, Qunfeng
    [J]. INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2023, 230
  • [6] Genome-Wide Identification and Expression Analysis of NPF Genes in Cucumber (Cucumis sativus L.)
    Zhang, Mengying
    Zhang, Wenyan
    Zheng, Zijian
    Zhang, Zhiping
    Hua, Bing
    Liu, Jiexia
    Miao, Minmin
    [J]. PLANTS-BASEL, 2023, 12 (06):
  • [7] Genome-wide identification and expression analysis of Hsf and Hsp gene families in cucumber (Cucumis sativus L.)
    Xueqian Chen
    Zhiyuan Wang
    Rui Tang
    Lina Wang
    Chunhua Chen
    Zhonghai Ren
    [J]. Plant Growth Regulation, 2021, 95 : 223 - 239
  • [8] Genome-wide identification and expression analysis of Hsf and Hsp gene families in cucumber (Cucumis sativus L.)
    Chen, Xueqian
    Wang, Zhiyuan
    Tang, Rui
    Wang, Lina
    Chen, Chunhua
    Ren, Zhonghai
    [J]. PLANT GROWTH REGULATION, 2021, 95 (02) : 223 - 239
  • [9] Genome-wide identification of SHMT family genes in cucumber (Cucumis sativus L.) and functional analyses of CsSHMTs in response to hormones and abiotic stresses
    Gao, Rong
    Luo, Yanyan
    Pan, Xuejuan
    Wang, Chunlei
    Liao, Weibiao
    [J]. 3 BIOTECH, 2022, 12 (11)
  • [10] Genome-wide identification of SHMT family genes in cucumber (Cucumis sativus L.) and functional analyses of CsSHMTs in response to hormones and abiotic stresses
    Rong Gao
    Yanyan Luo
    Xuejuan Pan
    Chunlei Wang
    Weibiao Liao
    [J]. 3 Biotech, 2022, 12