'Invisible' Molecular Dynamics Revealed for a Conformationally Chiral π-Stacked Perylene Bisimide Foldamer

被引:0
|
作者
Teichmann, Ben [1 ]
Sarosi, Menyhart [1 ,2 ]
Shoyama, Kazutaka [1 ,2 ]
Niyas, M. A. [1 ]
Dubey, Rajeev K. [1 ]
Wuerthner, Frank [1 ,2 ]
机构
[1] Univ Wurzburg, Inst Organ Chem, D-97074 Wurzburg, Germany
[2] Univ Wurzburg, Ctr Nanosyst Chem, D-97074 Wurzburg, Germany
关键词
chirality; dyes/pigments; foldamers; molecular dynamics; perylene bis(dicarboximide); STATE;
D O I
10.1002/anie.202414069
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Whilst energetic and kinetic aspects of folding processes are meanwhile well understood for natural biomacromolecules, the folding dynamics in so far studied artificial foldamer counterparts remain largely unexplored. This is due to the low energy barriers between their conformational isomers that make the dynamic processes undetectable with conventional methods such as UV/Vis absorption, fluorescence, and NMR spectroscopy, making such processes 'invisible'. Here we present an asymmetric perylene bisimide dimer (bis-PBI 1) that possesses conformational chirality in its folded state. Owing to the large interconversion barrier (>= 116 kJ mol-1), four stereoisomers could be separated and isolated. Since the interconversion between these stereoisomers requires the foldamer to first open and then to re-fold, the transformation of one stereoisomer into others allowed us to 'visualize' the dynamics of folding with time and determine its lifetimes and the energetic barriers associated with the folding process. Supported by quantum chemical calculations, we identified the open structure to be only a fleetingly metastable state of higher energy. Our experimental observation of the kinetics associated with the molecular dynamics in the PBI foldamer advances the fundamental understanding of folding in synthetic foldamers and paves the way for the design of smart functional materials.
引用
收藏
页数:9
相关论文
共 4 条
  • [1] Chiral perylene bisimide-melamine assemblies:: Hydrogen bond-directed growth of helically stacked dyes with chiroptical properties
    Thalacker, C
    Würthner, F
    ADVANCED FUNCTIONAL MATERIALS, 2002, 12 (03) : 209 - 218
  • [2] Molecular recognition directed supramolecular control over perylene-bisimide aggregation resulting in aggregation induced enhanced emission (AIEE) and induced chiral amplification
    Roy, Bappaditya
    Noguchi, Takao
    Tsuchiya, Youichi
    Yoshihara, Daisuke
    Yamamoto, Tatsuhiro
    Shinkai, Seiji
    JOURNAL OF MATERIALS CHEMISTRY C, 2015, 3 (10) : 2310 - 2318
  • [3] Clustering of stacked nucleobases in a stretched DNA conformation enhances facilitated diffusion of DNA binding proteins as revealed by molecular dynamics simulations
    Mondal, Anupam
    Bhattacherjee, Arnab
    JOURNAL OF BIOMOLECULAR STRUCTURE & DYNAMICS, 2019, 37 : 75 - 76
  • [4] "Invisible" Conformers of an Antifungal Disulfide Protein Revealed by Constrained Cold and Heat Unfolding, CEST-NMR Experiments, and Molecular Dynamics Calculations
    Fizil, Adam
    Gaspari, Zoltan
    Barna, Terezia
    Marx, Florentine
    Batta, Gyula
    CHEMISTRY-A EUROPEAN JOURNAL, 2015, 21 (13) : 5136 - 5144