Improvement in protein HSQC spectra from addition of betaine

被引:0
|
作者
O'Dea, Finn [1 ]
Seargeant, Aiden J. [1 ]
Hurcum, Jessica [1 ]
do Aido-Machado, Rodolpho [1 ,2 ]
Rowe, Michelle L. [1 ]
Baxter, Nicola J. [1 ]
Waltho, Jon P. [1 ]
Sayers, Jon R. [2 ]
Williamson, Mike P. [1 ]
机构
[1] Univ Sheffield, Sch Biosci, Sheffield S10 2TN, England
[2] Univ Sheffield, Sch Med & Populat Hlth, Div Clin Med, Sheffield S10 2RX, England
关键词
Osmolyte; Betaine; Fluctuation; Dynamics; Amide exchange; Barnase; Flap endonuclease; HYDROGEN-EXCHANGE; BACKBONE DYNAMICS; ESCHERICHIA-COLI; LIGAND-BINDING; STABILIZATION; OSMOLYTES; BARNASE; UREA; FLUCTUATIONS; MECHANISM;
D O I
10.1007/s10858-025-00463-0
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Addition of glycine betaine up to 1 M gave rise to increased intensity for some weak signals in the HSQC spectra of barnase and Plasmodium falciparum flap endonuclease. The signals that were enhanced were low intensity signals, often from amide groups with rapid internal motion (low order parameter). The majority of signals are however somewhat weaker because of the increased viscosity. Addition of betaine is shown to cause a small but significant overall increase in order parameter, no consistent effect on conformational change on the mu s-ms timescale, and a reduction in amide exchange rates, by a factor of about 3. The results are consistent with a model in which betaine leads to a reduction in fluctuations within the bulk water, which in turn produces a reduction in internal fluctuations of the protein.
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页数:8
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