Unit-cell parameters determination from a set of independent electron diffraction zonal patterns

被引:0
|
作者
Gorelik, Tatiana E. [1 ,2 ]
Miehe, Gerhard [3 ]
Buecker, Robert [4 ,5 ]
Yoshida, Kaname [6 ]
机构
[1] Forschungszentrum Julich, Ernst RuskaCenter ERC 1, Wilhelm Johnen Str, D-52428 Julich, Germany
[2] Helmholtz Ctr Infect Res, Dept Struct & Funct Prot, Inhoffenstr 7, D-38124 Braunschweig, Germany
[3] Darmstadt Tech Univ, Schnittspahnstr 9, D-64287 Darmstadt, Germany
[4] Rigaku Corp, 3-9-12 Matsubara Cho, Akishima, Tokyo 1968666, Japan
[5] Rigaku Europe SE, Hugenottenallee 167, D-63263 Neu Isenburg, Germany
[6] Japan Fine Ceram Ctr, Nanostruct Res Lab, Atsuta Ku,2-4-11 Mustuno, Nagoya, Aichi 4568587, Japan
关键词
electron crystallography; electron diffraction; 3D ED; microED; serial electron diffraction; unit-cell parameters determination; CRYSTAL-STRUCTURE; CRYSTALLOGRAPHY; PHASE; TOMOGRAPHY; PROGRAM;
D O I
10.1107/S2053273325000300
中图分类号
O6 [化学];
学科分类号
0703 ;
摘要
Due to the short de Broglie wavelength of electrons compared with X-rays, the curvature of their Ewald sphere is low, and individual electron diffraction patterns are nearly flat in reciprocal space. As a result, a reliable unit-cell determination from a set of randomly oriented electron diffraction patterns, an essential step in serial electron diffraction, becomes a non-trivial task. Here we describe an algorithm for unit-cell determination from a set of independent electron diffraction patterns, as implemented in the program PIEP (Program for Interpreting Electron diffraction Patterns), written in the early 1990s. We evaluate the performance of the algorithm by unit-cell determination of two known structures - copper perchlorophthalocyanine (CuPcCl16) and lysozyme, challenging the algorithm by high-index zone patterns and long crystallographic axes. Finally, we apply the procedure to a new, structurally uncharacterized five amino acid peptide.
引用
收藏
页码:124 / 136
页数:13
相关论文
共 50 条
  • [1] Unit-cell determination from randomly oriented electron-diffraction patterns
    Jiang, Linhua
    Georgieva, Dilyana
    Zandbergen, Henny W.
    Abrahams, Jan Pieter
    ACTA CRYSTALLOGRAPHICA SECTION D-BIOLOGICAL CRYSTALLOGRAPHY, 2009, 65 : 625 - 632
  • [2] THE DETERMINATION OF UNIT-CELL PARAMETERS FROM LAUE DIFFRACTION PATTERNS USING THEIR GNOMONIC PROJECTIONS
    CARR, PD
    CRUICKSHANK, DWJ
    HARDING, MM
    JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1992, 25 : 294 - 308
  • [4] ON THE DETERMINATION OF UNIT-CELL DIMENSIONS FROM POWDER DIFFRACTION PATTERNS
    DEWOLFF, PM
    ACTA CRYSTALLOGRAPHICA, 1957, 10 (09): : 590 - 595
  • [5] THE DETERMINATION OF UNIT-CELL PARAMETERS FROM A LAUE DIFFRACTION PATTERN
    CARR, PD
    DODD, IM
    HARDING, MM
    JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1993, 26 : 384 - 387
  • [7] Application of clustering techniques to electron-diffraction data: determination of unit-cell parameters
    Schlitt, Sebastian
    Gorelik, Tatiana E.
    Stewart, Andrew A.
    Schoemer, Elmar
    Raasch, Thorsten
    Kolb, Ute
    ACTA CRYSTALLOGRAPHICA SECTION A, 2012, 68 : 536 - 546
  • [8] Computer programs for unit-cell determination in electron diffraction experiments
    Li, XZ
    ULTRAMICROSCOPY, 2005, 102 (04) : 269 - 277
  • [9] DETERMINATION OF UNIT-CELL PARAMETERS OF SINGLE-CRYSTALS FROM ROTATION PATTERNS
    POPOVIC, S
    JOURNAL OF APPLIED CRYSTALLOGRAPHY, 1974, 7 (APR1): : 291 - 292
  • [10] UnitCell Tools, a package to determine unit-cell parameters from a single electron diffraction pattern
    Shi, Hong-Long
    Li, Zi-An
    IUCRJ, 2021, 8 : 805 - 813