Selection of Sclerodermus pupariae Reference Genes for Quantitative Real-Time PCR

被引:0
|
作者
Zhou, Ting [1 ]
Feng, Huahua [1 ]
Zhang, Jie [2 ]
Tang, Yanlong [2 ]
Dong, Xiaoling [1 ]
Kang, Kui [2 ,3 ]
机构
[1] Yangtze Univ, Coll Agr, MARA Key Lab Sustainable Crop Prod Middle Reaches, Jingzhou 434025, Peoples R China
[2] Zunyi Normal Univ, Coll Biol & Agr, Zunyi 563006, Peoples R China
[3] Hubei Univ Med, Biomed Res Inst, Shiyan 442000, Peoples R China
基金
中国国家自然科学基金;
关键词
S; pupariae; reference gene screening; qRT-PCR; developmental stages; EXPRESSION; NORMALIZATION;
D O I
10.3390/insects16030268
中图分类号
Q96 [昆虫学];
学科分类号
摘要
S. pupariae is a newly discovered species of parasitoid wasps. Research into its development, behavioral genetics, and molecular mechanisms provides valuable insights for improving integrated pest management strategies. Quantitative real-time PCR (qRT-PCR) is the most commonly used method for analyzing gene expression. This method requires the identification of stable reference genes to accurately evaluate transcriptional level variations. In this study, eight candidate reference genes (TUB, TBP, RPS18, GAPDH, 18S rRNA, RPL32, Actin, and EF1-alpha) were identified and evaluated for their suitability as reference genes. Gene expression levels across different developmental stages were analyzed using three software tools, GeNorm, NormFinder, and BestKeeper, and the online tool RefFinder. The overall ranking of reference gene stability was as follows: RPS18 > 18S rRNA > RPL32 > GAPDH > Actin > TUB > TPB > EF1-alpha. Ultimately, RPS18 was determined to be the most stable reference gene.
引用
收藏
页数:12
相关论文
共 50 条
  • [1] Selection and validation of reference genes for quantitative real-time PCR in Cymbidium sinense
    Tian, Yunfang
    Chu, Zhigang
    Wang, Huiyu
    Wang, Guoxia
    Wu, Si
    Yang, Yuzhen
    BIOTECHNIQUES, 2021, 72 (02) : 51 - 59
  • [2] Selection and Validation of Reference Genes in Dendrocalamus brandisii for Quantitative Real-Time PCR
    Jiang, Jutang
    Mu, Changhong
    Bai, Yucong
    Cheng, Wenlong
    Geng, Ruiman
    Xu, Junlei
    Dou, Yuping
    Cheng, Zhanchao
    Gao, Jian
    PLANTS-BASEL, 2024, 13 (17):
  • [3] Selection and validation of reference genes for quantitative Real-Time PCR in Arabis alpina
    Stephan, Lisa
    Tilmes, Vicky
    Huelskamp, Martin
    PLOS ONE, 2019, 14 (03):
  • [4] Selection of Reference Genes for Quantitative Real-Time PCR in Bamboo (Phyllostachys edulis)
    Fan, Chunjie
    Ma, Jinmin
    Guo, Qirong
    Li, Xiaotie
    Wang, Hui
    Lu, Mengzhu
    PLOS ONE, 2013, 8 (02):
  • [5] Selection of reference genes for quantitative real-time PCR in bovine preimplantation embryos
    Goossens, K
    Van Poucke, M
    Van Soom, A
    Vandesompele, J
    Van Zeveren, A
    Peelman, LJ
    BMC DEVELOPMENTAL BIOLOGY, 2005, 5
  • [6] Selection of Suitable Reference Genes for Quantitative Real-time PCR in Sapium sebiferum
    Chen, Xue
    Mao, Yingji
    Huang, Shengwei
    Ni, Jun
    Lu, Weili
    Hou, Jinyan
    Wang, Muting
    Zhao, Weiwei
    Li, Minghao
    Wang, Qiaojian
    Wu, Lifang
    FRONTIERS IN PLANT SCIENCE, 2017, 8
  • [7] Selection and validation of garlic reference genes for quantitative real-time PCR normalization
    Liu, Min
    Wu, Zhen
    Jiang, Fangling
    PLANT CELL TISSUE AND ORGAN CULTURE, 2015, 122 (02) : 435 - 444
  • [8] Selection and Validation of Reference Genes for Quantitative Real-time PCR in Gentiana macrophylla
    He, Yihan
    Yan, Hailing
    Hua, Wenping
    Huang, Yaya
    Wang, Zhezhi
    FRONTIERS IN PLANT SCIENCE, 2016, 7
  • [9] Selection and validation of garlic reference genes for quantitative real-time PCR normalization
    Min Liu
    Zhen Wu
    Fangling Jiang
    Plant Cell, Tissue and Organ Culture (PCTOC), 2015, 122 : 435 - 444
  • [10] Selection of reference genes for quantitative real-time RT-PCR analysis in citrus
    Jiawen Yan
    Feirong Yuan
    Guiyou Long
    Lei Qin
    Ziniu Deng
    Molecular Biology Reports, 2012, 39 : 1831 - 1838