A Quadruplex RT-qPCR for the Detection of African Swine Fever Virus, Classical Swine Fever Virus, Porcine Reproductive and Respiratory Syndrome Virus, and Porcine Pseudorabies Virus

被引:0
|
作者
Feng, Zhuo [1 ]
Shi, Kaichuang [1 ,2 ]
Yin, Yanwen [2 ]
Shi, Yuwen [1 ]
Feng, Shuping [2 ]
Long, Feng [2 ]
Wei, Zuzhang [1 ]
Si, Hongbin [1 ]
机构
[1] Guangxi Univ, Coll Anim Sci & Technol, Nanning 530005, Peoples R China
[2] Guangxi Ctr Anim Dis Control & Prevent, Nanning 530001, Peoples R China
来源
ANIMALS | 2024年 / 14卷 / 23期
关键词
African swine fever virus (ASFV); porcine reproductive and respiratory syndrome virus (PRRSV); classical swine fever virus (CSFV); porcine pseudorabies virus (PRV); multiplex RT-qPCR; GENETIC DIVERSITY; CHINA; PIGS;
D O I
10.3390/ani14233551
中图分类号
S8 [畜牧、 动物医学、狩猎、蚕、蜂];
学科分类号
0905 ;
摘要
African swine fever virus (ASFV), classical swine fever virus (CSFV), porcine reproductive and respiratory syndrome virus (PRRSV), and porcine pseudorabies virus (PRV) induce similar clinical signs in infected pigs, including hyperthermia, anorexia, hemorrhage, respiratory distress, neurological symptoms, and/or abortions in pregnant sows. The differential diagnosis of these diseases relies on laboratory examinations. In this study, a quadruplex RT-qPCR was established using four pairs of specific primers and probes aimed at the B646L (p72) gene of ASFV, the 5 ' untranslated region (5 ' UTR) of CSFV, the ORF6 gene of PRRSV, and the gB gene of PRV for the detection and differentiation of ASFV, CSFV, PRRSV, and PRV. The assay exhibited great sensitivity with limits of detection (LODs) of 134.585, 139.831, 147.076, and 142.331 copies/reaction for ASFV, CSFV, PRRSV, and PRV, respectively. The assay exclusively identified ASFV, CSFV, PRRSV, and PRV, yielding negative results for the other control swine viruses used in this study. The intra-assay and inter-assay coefficients of variation (CVs) were not higher than 1.12%, indicating good reproducibility of the assay. The quadruplex RT-qPCR assay was used to analyze 3116 clinical tissue samples from pigs in Guangxi province, China, from April 2023 to September 2024. ASFV, CSFV, PRRSV, and PRV had positivity rates of 10.84% (338/3116), 0.80% (25/3116), 14.92% (465/3116), and 1.38% (43/3116), respectively, demonstrating a coincidence rate of >= 99.45% with the previously described RT-qPCR assays, which were also used to test these same samples. The established assay was rapid, sensitive, and accurate in detecting and differentiating ASFV, CSFV, PRRSV, and PRV.
引用
收藏
页数:16
相关论文
共 50 条
  • [1] A multiplex PCR for simultaneous detection of classical swine fever virus, African swine fever virus, highly pathogenic porcine reproductive and respiratory syndrome virus, porcine reproductive and respiratory syndrome virus and pseudorabies in swines
    Hu, L.
    Lin, X. Y.
    Yang, Z. X.
    Yao, X. P.
    Li, G. L.
    Peng, S. Z.
    Wang, Y.
    POLISH JOURNAL OF VETERINARY SCIENCES, 2015, 18 (04): : 715 - 723
  • [2] A Multiplex Crystal Digital PCR for Detection of African Swine Fever Virus, Classical Swine Fever Virus, and Porcine Reproductive and Respiratory Syndrome Virus
    Shi, Kaichuang
    Chen, Yating
    Yin, Yanwen
    Long, Feng
    Feng, Shuping
    Liu, Huixin
    Qu, Sujie
    Si, Hongbin
    FRONTIERS IN VETERINARY SCIENCE, 2022, 9
  • [3] Simultaneous Detection of Porcine Respiratory Coronavirus, Porcine Reproductive and Respiratory Syndrome Virus, Swine Influenza Virus, and Pseudorabies Virus via Quadruplex One-Step RT-qPCR
    Ma, Yan
    Shi, Kaichuang
    Chen, Zhenhai
    Shi, Yuwen
    Zhou, Qingan
    Mo, Shenglan
    Wei, Haina
    Hu, Liping
    Mo, Meilan
    PATHOGENS, 2024, 13 (04):
  • [4] Development of a multiplex qRT-PCR assay for detection of African swine fever virus, classical swine fever virus and porcine reproductive and respiratory syndrome virus
    Chen, Yating
    Shi, Kaichuang
    Liu, Huixin
    Yin, Yanwen
    Zhao, Jing
    Long, Feng
    Lu, Wenjun
    Si, Hongbin
    JOURNAL OF VETERINARY SCIENCE, 2021, 22 (06)
  • [5] Multiplex PCR for the simultaneous detection of porcine reproductive and respiratory syndrome virus, classical swine fever virus, and porcine circovirus in pigs
    Liu, Jian-Kui
    Wei, Chun-Hua
    Yang, Xiao-Yan
    Dai, Ai-Ling
    Li, Xiao-Hua
    MOLECULAR AND CELLULAR PROBES, 2013, 27 (3-4) : 149 - 152
  • [6] Development of a novel hot-start multiplex PCR for simultaneous detection of classical swine fever virus, African swine fever virus, porcine circovirus type 2, porcine reproductive and respiratory syndrome virus and porcine parvovirus
    Giammarioli, Monica
    Pellegrini, Claudia
    Casciari, Cristina
    De Mia, Gian Mario
    VETERINARY RESEARCH COMMUNICATIONS, 2008, 32 (03) : 255 - 262
  • [7] Development of a novel hot-start multiplex PCR for simultaneous detection of classical swine fever virus, African swine fever virus, porcine circovirus type 2, porcine reproductive and respiratory syndrome virus and porcine parvovirus
    Monica Giammarioli
    Claudia Pellegrini
    Cristina Casciari
    Gian Mario De Mia
    Veterinary Research Communications, 2008, 32 : 255 - 262
  • [8] Seroprevalence of porcine reproductive and respiratory syndrome virus and classical swine fever virus in pigs of Mizoram, India
    Lalhruaipuii, K.
    Shakuntala, I.
    Sen, A.
    JOURNAL OF ENVIRONMENTAL BIOLOGY, 2020, 41 (04): : 915 - 920
  • [9] A multiplex RT-PCR for rapid and simultaneous detection of porcine teschovirus, classical swine fever virus, and porcine reproductive and respiratory syndrome virus in clinical specimens
    Liu, Shanshan
    Zhao, Yarong
    Hu, Quanbo
    Lv, Chaochao
    Zhang, Chaofan
    Zhao, Rui
    Hu, Feng
    Lin, Wencheng
    Cui, Shangjin
    JOURNAL OF VIROLOGICAL METHODS, 2011, 172 (1-2) : 88 - 92
  • [10] Does porcine reproductive and respiratory syndrome virus potentiate classical swine fever virus infection in weaner pigs?
    Depner, KR
    Lange, E
    Pontrakulpipat, S
    Fichtner, D
    JOURNAL OF VETERINARY MEDICINE SERIES B-INFECTIOUS DISEASES AND VETERINARY PUBLIC HEALTH, 1999, 46 (07): : 485 - 491