Scalable in-memory processing of omics workflows

被引:0
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作者
Elisseev, Vadim [1 ,2 ]
Gardiner, Laura-Jayne [1 ]
Krishna, Ritesh [1 ]
机构
[1] IBM Research Europe, Hartree Centre, Daresbury Laboratory, Keckwick Lane, Cheshire, WarringtonWA4 4AD, United Kingdom
[2] Wrexham Glyndwr University, Mold Rd, Wales, Wrexham LL11 2AW, United Kingdom
关键词
Bioinformatics;
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页码:1914 / 1924
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