A nucleic acid sequence-based amplification assay for real-time detection of norovirus genogroup II

被引:0
|
作者
Patterson, S.S. [1 ]
Smith, M.W. [2 ]
Casper, E.T. [1 ]
Huffman, D. [1 ]
Stark, L. [2 ]
Fries, D. [3 ]
Paul, J.H. [1 ,4 ]
机构
[1] College of Marine Science, University of South Florida, St Petersburg, FL, United States
[2] Florida Department of Health, Tampa, FL, United States
[3] Center for Ocean Technology, St Petersburg, FL, United States
[4] College of Marine Science, University of South Florida, St Petersburg, FL 33701, United States
来源
Journal of Applied Microbiology | 2006年 / 101卷 / 04期
关键词
Aims: To use molecular beacon based nucleic acid sequence-based amplification (NASBA) to develop a rapid; sensitive; specific detection method for norovirus (NV) genogroupII (GII). Methods and Results: A method to detect NV GII from environmental samples using real-time NASBA was developed. This method was routinely sensitive to 100 copies of target RNA and intermittent amplification occurred with as few as 10 copies. Quantitative estimates of viral load were possible over at least four orders of magnitude. Conclusions: The NASBA method described here is a reliable and sensitive assay for the detection of NV. This method has the potential to be linked to a handheld NASBA device that would make this real-time assay a portable and inexpensive alternative to bench-top; lab-based assays. Significance and Impact of the Study: The development of the real-time NASBA assay described here has resulted in a simple; rapid;
D O I
暂无
中图分类号
学科分类号
摘要
Journal article (JA)
引用
收藏
页码:956 / 963
相关论文
共 50 条
  • [1] A nucleic acid sequence-based amplification assay for real-time detection of norovirus genogroup II
    Patterson, S. S.
    Smith, M. W.
    Casper, E. T.
    Huffman, D.
    Stark, L.
    Fries, D.
    Paul, J. H.
    JOURNAL OF APPLIED MICROBIOLOGY, 2006, 101 (04) : 956 - 963
  • [2] Real-time nucleic acid sequence-based amplification assay for detection of hepatitis A virus
    El Galil, KHA
    El Sokkary, MA
    Kheira, SM
    Salazar, AM
    Yates, MV
    Chen, W
    Mulchandani, A
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2005, 71 (11) : 7113 - 7116
  • [3] Detection of Vibrio cholerae by real-time nucleic acid sequence-based amplification
    Fykse, Else M.
    Skogan, Gunnar
    Davies, William
    Olsen, Jaran Strand
    Blatny, Janet M.
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2007, 73 (05) : 1457 - 1466
  • [4] Detection of Mycoplasma pneumoniae by real-time nucleic acid sequence-based amplification
    Loens, K
    Ieven, M
    Ursi, D
    Beck, T
    Overdijk, M
    Sillekens, P
    Goossens, H
    JOURNAL OF CLINICAL MICROBIOLOGY, 2003, 41 (09) : 4448 - 4450
  • [5] On-chip real-time nucleic acid sequence-based amplification for RNA detection and amplification
    Tsaloglou, Maria-Nefeli
    Bahi, Mahadji M.
    Waugh, Edward M.
    Morgan, Hywel
    Mowlem, Matthew
    ANALYTICAL METHODS, 2011, 3 (09) : 2127 - 2133
  • [6] Multiparametric duplex real-time nucleic acid sequence-based amplification assay for mRNA profiling
    Verjat, T
    Cerrato, E
    Jacobs, M
    Leissner, P
    Mougin, B
    BIOTECHNIQUES, 2004, 37 (03) : 476 - 481
  • [7] Real-time nucleic acid sequence-based amplification in nanoliter volumes
    Gulliksen, A
    Solli, L
    Karlsen, F
    Rogne, H
    Hovig, E
    Nordstrom, T
    Sirevåg, R
    ANALYTICAL CHEMISTRY, 2004, 76 (01) : 9 - 14
  • [8] Real-time detection of noroviruses in surface water by use of a broadly reactive nucleic acid sequence-based amplification assay
    Rutjes, Saskia A.
    van den Berg, Harold H. J. L.
    Lodder, Willernijn J.
    Husman, Ana Maria de Roda
    APPLIED AND ENVIRONMENTAL MICROBIOLOGY, 2006, 72 (08) : 5349 - 5358
  • [9] Development of a real-time nucleic acid sequence-based amplification assay for the rapid detection of Salmonella spp. from food
    Zhai, Ligong
    Liu, Hongxia
    Chen, Qiming
    Lu, Zhaoxin
    Zhang, Chong
    Lv, Fengxia
    Bie, Xiaomei
    BRAZILIAN JOURNAL OF MICROBIOLOGY, 2019, 50 (01) : 255 - 261
  • [10] Detection and identification of human Plasmodium species with real-time quantitative nucleic acid sequence-based amplification
    Mens, Petra F.
    Schoone, Gerard J.
    Kager, Piet A.
    Schallig, Henk D. F. H.
    MALARIA JOURNAL, 2006, 5 (1)