Off-target Identification of TH588 Based on Thermal Proteome Profiling

被引:0
|
作者
Liu Z.-Y. [1 ,2 ]
Zhu S.-B. [1 ,2 ]
Deng H.-T. [1 ,2 ]
Chen Y.-L. [1 ,2 ]
机构
[1] School of Life Sciences, Tsinghua University, Beijing
[2] MOE Key Laboratory of Bioinformatics, Beijing
关键词
MTH1; Off-target; TH588; Thermal proteome profiling;
D O I
10.7538/zpxb.2021.0109
中图分类号
学科分类号
摘要
Target identification of bioactive molecules is important for deciphering their functions and action mechanism in cells, as well as for drug development. Thermal proteome profiling (TPP), based on the principle that protein-ligand binding can increase the thermal stability of proteins, is a new technology for identifying target proteins of bioactive molecule. One of the advantages of TPP is that it doesn't require functionalization of a bioactive compound, which significantly broadens its application in drug discovery and development. TH588 is an inhibitor of 7, 8-dihydro-8-oxoguanine triphosphatase (MTH1), and it inhibits the proliferation of tumor cells by increasing the oxidative damage of DNA. However, previous studies showed that TH588 also executed MTH1-independent anti-tumor effects on multiple cancers by depolymerizing tubulin, increasing oxidative damage, and inactivating PI3K-AKT-mTOR signaling pathway. Therefore, identification of off-targets for TH588 is essential for understanding TH588 functions and its further chemical modification in drug development. Herein, a detailed experiment procedure of TPP workflow was presented, and 28 directly binding proteins and 53 indirectly binding proteins of TH588 was identified for understanding its anti-proliferative functions. © 2021, Editorial Board of Journal of Chinese Mass Spectrometry Society. All right reserved.
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页码:951 / 961
页数:10
相关论文
共 18 条
  • [1] CHANG J, KIM Y, KWON H J., Advances in identification and validation of protein targets of natural products without chemical modification, Natural Product Reports, 33, 5, pp. 719-730, (2016)
  • [2] SAVITSKI M M, REINHARD FRIEDRICH B M, FRANKEN H, WERNER T, SAVITSKI M F, EBERHARD D, MARTINEZ MOLINA D, JAFARI R, DOVEGA R B, KLAEGER S, KUSTER B, NORDLUND P, BANTSCHEFF M, DREWES G., Tracking cancer drugs in living cells by thermal profiling of the proteome[J], Science, 346, 6 205, pp. 12557-12584, (2014)
  • [3] REINHARD F B M, EBERHARD D, WERNER T, FRANKEN H, CHILDS D, DOCE C, SAVITSKI M F, HUBER W, BANTSCHEFF M, SAVITSKI M M, DREWES G., Thermal proteome profiling monitors ligand interactions with cellular membrane proteins, Nature Methods, 12, pp. 1129-1131, (2015)
  • [4] GAD H, KOOLMEISTER T, JEMTH A S, ESHTAD S, JACQUES S A, STROM C E, SVENSSON L M, SCHULTZ N, LUNDBACK T, EINARSDOTTIR B O, SALEH A, GOKTURK C, BARANCZEWSKI P, SVENSSON R, BERNTSSON R P, GUSTAFSSON R, STROMBERG K, SANJIV K, JACQUES-CORDONNIER M C, DESROSES M, GUSTAVSSON A L, OLOFSSON R, JOHANSSON F, HOMAN E J, LOSEVA O, BRAUTIGAM L, JOHANSSON L, HOGLUND A, HAGENKORT A, PHAM T, ALTUN M, GAUGAZ F Z, VIKINGSSON S, EVERS B, HENRIKSSON M, VALLIN K S, WALLNER O A, HAMMARSTROM L G, WIITA E, ALMLOF I, KA
  • [5] IKEJIRI F, HONMA Y, KASUKABE T, URANO T, SUZUMIYA J., TH588, an MTH1 inhibitor, enhances phenethyl isothiocyanate-induced growth inhibition in pancreatic cancer cells[J], Oncology Letters, 15, 3, pp. 3240-3244, (2018)
  • [6] PETROCCHI A, LEO E, REYNA N J, HAMILTON M M, SHI X, PARKER C A, MSEEH F, BARDENHAGEN J P, LEONARD P, CROSS J B, HUANG S, JIANG Y Y, CARDOZO M, DRAETTA G, MARSZALEK J R, TONIATTI C, JONES P, LEWIS R T., Identification of potent and selective MTH1 inhibitors[J], Bioorganic & Medicinal Chemistry Letters, 26, 6, pp. 1503-1507, (2016)
  • [7] KETTLE J G, ALWAN H, BISTA M, BREED J, DAVIES N L, ECKERSLEY K, FILLERY S, FOOTE K M, GOODWIN L, JONES D R, KACK H, LAU A, NISSINK J W, READ J, SCOTT J S, TAYLOR B, WALKER G, WISSLER L, WYLOT M., Potent and selective inhibitors of MTH1 probe its role in cancer cell survival[J], Journal of Medicinal Chemistry, 59, 6, pp. 2346-2361, (2016)
  • [8] KAWAMURA T, KAWATANI M, MUROI M, KONDOH Y, FUTAMURA Y, AONO H, TANAKA M, HONDA K, OSADA H., Proteomic profiling of small-molecule inhibitors reveals dispensability of MTH1 for cancer cell survival, Scientific Reports, 6, 1, pp. 265-321, (2016)
  • [9] OKA S, OHNO M, TSUCHIMOTO D, SAKUMI K, FURUICHI M, NAKABEPPU Y., Two distinct pathways of cell death triggered by oxidative damage to nuclear and mitochondrial DNAs, EMBO Journal, 27, 2, pp. 421-432, (2008)
  • [10] ELLERMANN M, EHEIM A, RAHM F, VIKLUND J, GUENTHER J, ANDERSSON M, ERICSSON U, FORSBLOM R, GINMAN T, LINDSTROM J, SILVANDER C, TRESAUGUES L, GIESE A, BUNSE S, NEUHAUS R, WEISKE J, QUANZ M, GLASAUER A, NOWAK-REPPEL K, BADER B, IRLBACHER H, MEYER H, QUEISSER N, BAUSER M, HAEGEBARTH A, GORJANACZ M., Novel class of potent and cellularly active inhibitors devalidates MTH1 as broad-spectrum cancer target[J], ACS Chemical Biology, 12, 8, pp. 1986-1992, (2017)