Drug-Disease Association Prediction Based on Meta-Path Heterogeneous Network with Global Graph Attention

被引:0
|
作者
Yu, Yong [1 ,2 ]
Yang, Yujie [1 ]
Li, Xiaohan [1 ]
Gao, Yue [1 ]
Yu, Qian [1 ]
机构
[1] School of Software, Yunnan University, Kunming,650504, China
[2] Key Laboratory in Software Engineering of Yunnan Province, Kunming,650504, China
关键词
Graph theory;
D O I
10.12178/1001-0548.2023235
中图分类号
O144 [集合论]; O157 [组合数学(组合学)];
学科分类号
070104 ;
摘要
In this paper, a heterogeneous network model based on global graph attention meta-path, named MHNGA, is proposed for drug-disease association prediction. Firstly, the data of drugs and diseases are collected, and the known drug-disease association, drug similarity and disease similarity are constructed as a heterogeneous network. Secondly, multiple meta-path-based subgraphs are introduced, and the graph attention neural network is used to extract the features of the neighbor nodes of these subgraphs, and the features are enhanced by channel attention and spatial attention mechanisms. Finally, through the evaluation of ten-fold cross-validation, MHNGA achieves 93.5% of the area under the accurate recall curve and 99.4% of the accuracy. © 2024 University of Electronic Science and Technology of China. All rights reserved.
引用
收藏
页码:576 / 583
相关论文
共 50 条
  • [1] RLFDDA: a meta-path based graph representation learning model for drug-disease association prediction
    Zhang, Meng-Long
    Zhao, Bo-Wei
    Su, Xiao-Rui
    He, Yi-Zhou
    Yang, Yue
    Hu, Lun
    BMC BIOINFORMATICS, 2022, 23 (01)
  • [2] GCNGAT: Drug-disease association prediction based on graph convolution neural network and graph attention network
    Yang, Runtao
    Fu, Yao
    Zhang, Qian
    Zhang, Lina
    ARTIFICIAL INTELLIGENCE IN MEDICINE, 2024, 150
  • [3] Heterogeneous Information Network Embedding with Meta-path Based Graph Attention Networks
    Cao, Meng
    Ma, Xiying
    Xu, Ming
    Wang, Chongjun
    ARTIFICIAL NEURAL NETWORKS AND MACHINE LEARNING - ICANN 2019: WORKSHOP AND SPECIAL SESSIONS, 2019, 11731 : 622 - 634
  • [4] RLFDDA: a meta-path based graph representation learning model for drug–disease association prediction
    Meng-Long Zhang
    Bo-Wei Zhao
    Xiao-Rui Su
    Yi-Zhou He
    Yue Yang
    Lun Hu
    BMC Bioinformatics, 23
  • [5] GRTR: Drug-Disease Association Prediction Based on Graph Regularized Transductive Regression on Heterogeneous Network
    Zhu, Qiao
    Luo, Jiawei
    Ding, Pingjian
    Xiao, Qiu
    BIOINFORMATICS RESEARCH AND APPLICATIONS, ISBRA 2018, 2018, 10847 : 13 - 25
  • [6] DAHNGC: A Graph Convolution Model for Drug-Disease Association Prediction by Using Heterogeneous Network
    Zhong, Jiancheng
    Cui, Pan
    Zhu, Yihong
    Xiao, Qiu
    Qu, Zuohang
    JOURNAL OF COMPUTATIONAL BIOLOGY, 2023, 30 (09) : 1019 - 1033
  • [7] Meta-Path Based Gene Ontology Profiles for Predicting Drug-Disease Associations
    Kawichai, Thitipong
    Suratanee, Apichat
    Plaimas, Kitiporn
    IEEE ACCESS, 2021, 9 : 41809 - 41820
  • [8] Drug-Target Interactions Prediction Based on Meta-path of Heterogeneous Information Network
    Liao, Yiming
    Ouyang, Chunping
    Liu, Yongbin
    Hu, Fuyu
    Beijing Daxue Xuebao (Ziran Kexue Ban)/Acta Scientiarum Naturalium Universitatis Pekinensis, 2022, 58 (01): : 37 - 44
  • [9] Meta-path based heterogeneous combat network link prediction
    Li, Jichao
    Ge, Bingfeng
    Yang, Kewei
    Chen, Yingwu
    Tan, Yuejin
    PHYSICA A-STATISTICAL MECHANICS AND ITS APPLICATIONS, 2017, 482 : 507 - 523
  • [10] Predicting Drug-Disease Associations via Meta-path Representation Learning based on Heterogeneous Information Net works
    Zhang, Meng-Long
    Zhao, Bo-Wei
    Hu, Lun
    You, Zhu-Hong
    Chen, Zhan-Heng
    INTELLIGENT COMPUTING THEORIES AND APPLICATION, ICIC 2022, PT II, 2022, 13394 : 220 - 232