Mushroom Phenotypic Generation Based on Generative Adversarial Network

被引:0
|
作者
Yuan P. [1 ]
Wu M. [1 ]
Zhai Z. [2 ]
Yang C. [1 ]
Xu H. [1 ]
机构
[1] College of Information Science and Technology, Nanjing Agricultural University, Nanjing
[2] Superior School of Technical Engineering and Telecommunication Systems, Technical University of Madrid, Madrid
关键词
Discriminator; Generative adversarial network; Generator; Mushroom phenotype; Wasserstein distance;
D O I
10.6041/j.issn.1000-1298.2019.12.026
中图分类号
学科分类号
摘要
Phenotypic data analysis based on image data and machine learning has become one of the important issues in interdisciplinary research. In recent years, the big data and deep learning techniques have provided powerful tools for image analysis and machine vision. Currently, the generative adversarial network is becoming a novel framework for the process estimation generation model. It can generate high-quality image data and provide an effective approach for solving the problem of small sample data and unbalanced data analysis and so on. As one of the important fungi, mushroom has a plenty of varieties and the long tail distribution and non-equilibrium of the data distribution bring great difficulties to its phenotypic intelligent classification and identification. Aiming to design a high-efficiency mushroom phenotype-resistance network MPGAN with mushroom phenotype data. The phenotypic data generation technology of mushroom was studied, and the generated confrontation network structure for mushroom phenotypic data generation was designed. The system was divided into two modules: model training and phenotypic image generation. To improve the quality of the generation, Wasserstein distances and loss functions with gradient penalty were used. Experiments were conducted on two datasets: open source data and private data sets, and results analysis were performed with the learning rate, number of batches required to process EPOCH and Wasserstein distances. The phenotypic data of the mushroom produced with this approach can furnish data basis for the classification of the mushroom data in the later stage, and provide solutions for solving the issues of unbalanced data and long tail distribution of the mushroom classification. The research can provide technical support for the study of high quality mushroom phenotypic data sets. © 2019, Chinese Society of Agricultural Machinery. All right reserved.
引用
收藏
页码:231 / 239
页数:8
相关论文
共 34 条
  • [1] Zhou J., Tardieu F., Pridmore T., Et al., Plant phenomics: history, present status and challenges, Journal of Nanjing Agricultural University, 41, 4, pp. 580-588, (2018)
  • [2] Ribaut J.M., Vicente M.D., Delannay X., Molecular breeding in developing countries: challenges and perspectives, Current Opinion in Plant Biology, 13, 2, pp. 213-218, (2010)
  • [3] Tang H., Ni F., Li X., Et al., Analysis of the advance in plant phenomics research based on Scopus tools, Journal of Nanjing Agricultural University, 41, 6, pp. 169-177, (2018)
  • [4] Rahaman M., Chen D., Gillani Z., Et al., Advanced phenotyping and phenotype data analysis for the study of plant growth and development, Frontiers in Plant Science, 619, 6, pp. 1-15, (2015)
  • [5] Houle D., Govindaraju D.R., Omholt S., Phenomics: the next challenge, Nature Reviews Genetics, 11, 12, pp. 855-866, (2010)
  • [6] Eberius M., Lima-Guerra J., High-throughput plant phenotyping-data acquisition, transformation, and analysis, Bioinformatics, pp. 259-278, (2009)
  • [7] Namin S.T., Esmaeilzadeh M., Najafi M., Et al., Deep phenotyping: deep learning for temporal phenotype/genotype classification, Plant Methods, 14, 66, pp. 1-14, (2018)
  • [8] Singh A., Ganapathysubramanian B., Singh A.K., Et al., Machine learning for high-throughput stress phenotyping in plants, Trends in Plant Science, 21, 2, pp. 110-124, (2016)
  • [9] Liu Y., Zhou Y., Liu X., Et al., Wasserstein GAN-based small-sample augmentation for new-generation artificial intelligence: a case study of cancer-staging data in biology, Engineering, 5, 1, pp. 156-163, (2019)
  • [10] Krawczyk B., Learning from imbalanced data: open challenges and future directions, Progress in Artificial Intelligence, 5, 4, pp. 221-232, (2016)