Reducing approximate Longest Common Subsequence to approximate Edit Distance

被引:0
|
作者
Rubinstein, Aviad [1 ,2 ]
Song, Zhao [2 ,3 ]
机构
[1] Stanford Univ, Stanford, CA 94305 USA
[2] Harvard Univ, Cambridge, MA USA
[3] Simons Berkeley, Berkeley, CA USA
关键词
D O I
暂无
中图分类号
TP18 [人工智能理论];
学科分类号
081104 ; 0812 ; 0835 ; 1405 ;
摘要
Given a pair of n-character strings, the problems of computing their Longest Common Subsequence and Edit Distance have been extensively studied for decades. For exact algorithms, LCS and Edit Distance (with character insertions and deletions) are equivalent; the state of the art running time is (almost) quadratic in n, and this is tight under plausible fine-grained complexity assumptions. But for approximation algorithms the picture is different: there is a long line of works with improved approximation factors for Edit Distance, but for LCS (with binary strings) only a trivial 1=2-approximation was known. In this work we give a reduction from approximate LCS to approximate Edit Distance, yielding the first efficient (1/2 + epsilon)-approximation algorithm for LCS for some constant epsilon > 0
引用
收藏
页码:1591 / 1600
页数:10
相关论文
共 50 条
  • [1] Reducing approximate Longest Common Subsequence to approximate Edit Distance
    Rubinstein, Aviad
    Song, Zhao
    [J]. PROCEEDINGS OF THE THIRTY-FIRST ANNUAL ACM-SIAM SYMPOSIUM ON DISCRETE ALGORITHMS (SODA'20), 2020, : 1591 - 1600
  • [2] Approximate swap and mismatch edit distance
    Dombb, Yair
    Lipsky, Ohad
    Porat, Benny
    Porat, Ely
    Tsur, Asaf
    [J]. STRING PROCESSING AND INFORMATION RETRIEVAL, PROCEEDINGS, 2007, 4726 : 149 - 163
  • [3] The approximate swap and mismatch edit distance
    Dombb, Yair
    Lipsky, Ohad
    Porat, Benny
    Porat, Ely
    Tsur, Asaf
    [J]. THEORETICAL COMPUTER SCIENCE, 2010, 411 (43) : 3814 - 3822
  • [4] A Beam Search for the Longest Common Subsequence Problem Guided by a Novel Approximate Expected Length Calculation
    Djukanovic, Marko
    Raidl, Guenther R.
    Blum, Christian
    [J]. MACHINE LEARNING, OPTIMIZATION, AND DATA SCIENCE, 2019, 11943 : 154 - 167
  • [5] Approximate Graph Edit Distance in Quadratic Time
    Riesen, Kaspar
    Ferrer, Miquel
    Bunke, Horst
    [J]. IEEE-ACM TRANSACTIONS ON COMPUTATIONAL BIOLOGY AND BIOINFORMATICS, 2020, 17 (02) : 483 - 494
  • [6] The Longest Common Subsequence Distance using a Complexity Factor
    Hasna, Octavian Lucian
    Potolea, Rodica
    [J]. KDIR: PROCEEDINGS OF THE 8TH INTERNATIONAL JOINT CONFERENCE ON KNOWLEDGE DISCOVERY, KNOWLEDGE ENGINEERING AND KNOWLEDGE MANAGEMENT - VOL. 1, 2016, : 336 - 343
  • [7] Approximate Circular Pattern Matching Under Edit Distance
    Charalampopoulos, Panagiotis
    Pissis, Solon P.
    Radoszewski, Jakub
    Rytter, Wojciech
    Walen, Tomasz
    Zuba, Wiktor
    [J]. 41ST INTERNATIONAL SYMPOSIUM ON THEORETICAL ASPECTS OF COMPUTER SCIENCE, STACS 2024, 2024, 289
  • [8] Approximate membership for regular languages modulo the edit distance
    Ndione, Antoine
    Lemay, Aurelien
    Niehren, Joachim
    [J]. THEORETICAL COMPUTER SCIENCE, 2013, 487 : 37 - 49
  • [9] Faster Recovery of Approximate Periods over Edit Distance
    Kociumaka, Tomasz
    Radoszewski, Jakub
    Rytter, Wojciech
    Straszynski, Juliusz
    Walen, Tomasz
    Zuba, Wiktor
    [J]. STRING PROCESSING AND INFORMATION RETRIEVAL, SPIRE 2018, 2018, 11147 : 233 - 240
  • [10] Efficient approximate approach for graph edit distance problem
    Dabah, Adel
    Chegrane, Ibrahim
    Yahiaoui, Said
    [J]. PATTERN RECOGNITION LETTERS, 2021, 151 : 310 - 316