A Comprehensive Insight and In Silico Analysis of CircRNAs in Hepatocellular Carcinoma: A Step toward ncRNA-Based Precision Medicine

被引:0
|
作者
Youness, Rana A. [1 ]
Hassan, Hossam A. [1 ]
Abaza, Tasneem [1 ,2 ]
Hady, Ahmed A. [3 ]
El Magdoub, Hekmat M. [4 ]
Ali, Mohamed [5 ,6 ]
Vogel, Johannes [7 ,8 ]
Thiersch, Markus [7 ,8 ]
Gassmann, Max [7 ,8 ]
Hamdy, Nadia M. [9 ]
Aboouf, Mostafa A. [7 ,8 ,9 ]
机构
[1] German Int Univ GIU, Fac Biotechnol, Mol Biol & Biochem Dept, Mol Genet Res Team MGRT, Cairo 11835, Egypt
[2] Egypt Japan Univ Sci & Technol E JUST, Inst Basic & Appl Sci BAS, Biotechnol Program, New Borg El Arab 21934, Egypt
[3] Mansoura Univ, Fac Med, Clin Oncol Dept, Mansoura 35511, Egypt
[4] Misr Int Univ, Fac Pharm, Biochem Dept, Cairo 19648, Egypt
[5] Univ Chicago, Dept Obstet & Gynecol, Chicago, IL 60637 USA
[6] Ain Shams Univ, Fac Pharm, Clin Pharm Dept, Cairo 11566, Egypt
[7] Univ Zurich, Zurich Ctr Integrat Human Physiol, CH-8057 Zurich, Switzerland
[8] Univ Zurich, Inst V Physiol, CH-8057 Zurich, Switzerland
[9] Ain Shams Univ, Fac Pharm, Biochem Dept, Cairo 11566, Egypt
关键词
circRNAs; HCC; initiation; progression; metastasis; epigenetics; theranostics; ncRNA; in silico; bioinformatics; GROWTH-FACTOR AXIS; CIRCULAR RNAS; MESSENGER-RNA; MIAT LNCRNA; PROTEIN; PROGRESSION; OBESITY; ROLES; TUMORIGENESIS; DEGRADATION;
D O I
10.3390/cells13151245
中图分类号
Q2 [细胞生物学];
学科分类号
071009 ; 090102 ;
摘要
Circular RNAs (circRNAs) are cardinal players in numerous physiological and pathological processes. CircRNAs play dual roles as tumor suppressors and oncogenes in different oncological contexts, including hepatocellular carcinoma (HCC). Their roles significantly impact the disease at all stages, including initiation, development, progression, invasion, and metastasis, in addition to the response to treatment. In this review, we discuss the biogenesis and regulatory functional roles of circRNAs, as well as circRNA-protein-mRNA ternary complex formation, elucidating the intricate pathways tuned by circRNAs to modulate gene expression and cellular processes through a comprehensive literature search, in silico search, and bioinformatics analysis. With a particular focus on the interplay between circRNAs, epigenetics, and HCC pathology, the article sets the stage for further exploration of circRNAs as novel investigational theranostic agents in the dynamic realm of HCC.
引用
下载
收藏
页数:21
相关论文
共 50 条
  • [1] Comprehensive insights and In silico analysis into the emerging role of LincRNAs in lung diseases pathogenesis; a step toward ncRNA precision
    Nadia M. Hamdy
    Mohamed Bakr Zaki
    Nourhan M. Abdelmaksoud
    Shereen Saeid Elshaer
    Mai A. Abd-Elmawla
    Nehal I. Rizk
    Doaa Fathi
    Ahmed S. Doghish
    Ahmed I. Abulsoud
    Functional & Integrative Genomics, 2025, 25 (1)
  • [2] Molecular subtyping of hepatocellular carcinoma: A step toward precision medicine
    Wu, Yichao
    Liu, Zhikun
    Xu, Xiao
    CANCER COMMUNICATIONS, 2020, 40 (12) : 681 - 693
  • [3] Circulating tumor cells: A step toward precision medicine in hepatocellular carcinoma
    Teng, Pai-Chi
    Agopian, Vatche G.
    Lin, Ting-Yi
    You, Sungyong
    Zhu, Yazhen
    Tseng, Hsian-Rong
    Yang, Ju Dong
    JOURNAL OF GASTROENTEROLOGY AND HEPATOLOGY, 2022, 37 (07) : 1179 - 1190
  • [4] Step by Step Toward Biomarker-Based Precision Medicine in Heart Failure
    Bayes-Genis, Antoni
    Nunez, Julio
    CLINICAL CHEMISTRY, 2019, 65 (10) : 1187 - 1189
  • [5] The Intergenic Type LncRNA (LINC RNA) Faces in Cancer with In Silico Scope and a Directed Lens to LINC00511: A Step toward ncRNA Precision
    Eldash, Shorouk
    Sanad, Eman F.
    Nada, Dina
    Hamdy, Nadia M.
    NON-CODING RNA, 2023, 9 (05)
  • [6] Leveraging machine learning for early recurrence prediction in hepatocellular carcinoma: A step towards precision medicine
    Ravikulan, Abhimati
    Rostami, Kamran
    WORLD JOURNAL OF GASTROENTEROLOGY, 2024, 30 (05) : 424 - 428
  • [7] Comprehensive Analysis of TICRR in Hepatocellular Carcinoma Based on Bioinformatics Analysis
    Jing-Jing Chen
    Lu-Lu Zhang
    Zhen Liu
    Wan Qi Men
    Fang Chen
    Jilu Shen
    Biochemical Genetics, 2024, 62 : 1 - 17
  • [8] Comprehensive Analysis of TICRR in Hepatocellular Carcinoma Based on Bioinformatics Analysis
    Chen, Jing-Jing
    Zhang, Lu-Lu
    Liu, Zhen
    Men, Wan Qi
    Chen, Fang
    Shen, Jilu
    BIOCHEMICAL GENETICS, 2024, 62 (01) : 1 - 17
  • [9] Transcriptome analysis creates a new era of precision medicine for managing recurrent hepatocellular carcinoma
    Chiang, Chun-Cheng
    Yeh, Hsuan
    Lim, Siew-Na
    Lin, Wey-Ran
    WORLD JOURNAL OF GASTROENTEROLOGY, 2023, 29 (05) : 780 - 799
  • [10] Transcriptome analysis creates a new era of precision medicine for managing recurrent hepatocellular carcinoma
    Chun-Cheng Chiang
    Hsuan Yeh
    Siew-Na Lim
    Wey-Ran Lin
    World Journal of Gastroenterology, 2023, 29 (05) : 780 - 799