A Novel Mitochondrial-Related Gene Signature for the Prediction of Prognosis and Therapeutic Efficacy in Lower-Grade Glioma

被引:0
|
作者
Yang, Jingyi [1 ]
Shen, Lei [1 ]
Zhou, Jiabin [1 ]
Wu, Ji [1 ]
Yue, Chuqiao [1 ]
Wang, Tiansheng [1 ]
Chai, Songshan [1 ]
Cai, Yuankun [1 ]
Xu, Dongyuan [1 ]
Lei, Yu [1 ]
Zhao, Jingwei [1 ]
Zhou, Yixuan [1 ]
Mei, Zhimin [1 ]
Xiong, Nanxiang [1 ]
机构
[1] Wuhan Univ, Zhongnan Hosp, Dept Neurosurg, 169,Donghu Rd, Wuhan 430071, Hubei, Peoples R China
关键词
Lower-grade glioma; Mitochondrial-related genes; Prognosis; Therapeutic efficacy; OCIA domain containing 2; EXPRESSION; SENSITIVITY;
D O I
10.1007/s10528-024-10928-w
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Lower-grade glioma (LGG) is a common primary brain tumor with a highly heterogeneous clinical presentation, and its prognosis cannot be accurately predicted by current histopathology. It has been found that mitochondria play an important role in hypoxia, angiogenesis, and energy metabolism in glioma, and mitochondrial function may have an important impact on LGG prognosis. The goal of this study was to develop a novel prognostic model based on Mitochondrial-related genes (MRGs). We first analyzed the somatic alterations profiles of MRGs in patients with LGG and found that somatic alterations were common in LGG and correlated with prognosis. Using RNA-seq data from TCGA and CGGA, 12 prognosis-related MRGs were identified to construct a mitochondrial activation score (MiAS) model by combining univariate regression and LASSO regression analysis. The model and nomogram were evaluated using the area under the ROC curve with AUC = 0.910. The model was closely correlated with the clinical characteristics of LGG patients and performed well in predicting the prognosis of LGG patients with significantly shorter overall survival (OS) time in the high-MiAS group. GSVA and GSEA results showed that oxidative stress, pro-cancer, and immune-related pathways were significantly enriched in the high-MiAS group. CIBERSORT results showed that MiAS was significantly associated with immune cell infiltration in LGG. Macrophage M1 and follicular helper T cells had increased infiltration in the high-MiAS group. TIDE predicted a better immunotherapy outcome in patients in the low-MiAS group. Finally, using data from the CTRPv2 and GDSC2 datasets to assess chemotherapy response in LGG, it was predicted that the chemotherapeutic agents AZD6482, MG-132, and PLX-4720 might be potential agents for patients in the high-MiAS group of LGG. In addition, we performed in vitro experiments and found that knockdown of OCIAD2 expression reduced the abilities of glioma cells to proliferate, migrate, and invade. In contrast, overexpression of OCIAD2 enhanced these abilities of glioma cells. This study found that MRGs were correlated with LGG patient prognosis, which is expected to provide new treatment strategies for LGG patients with different MiAS.
引用
收藏
页数:27
相关论文
共 50 条
  • [1] Novel mitochondrial-related gene signature predicts prognosis and immunological status in glioma
    Liu, Yongsheng
    Cai, Lize
    Wang, Hao
    Yao, Lin
    Zhang, Kai
    Chen, Guangliang
    Zhou, Youxin
    TRANSLATIONAL CANCER RESEARCH, 2024, 13 (07)
  • [2] Novel Immune-Related Gene Signature for Risk Stratification and Prognosis of Survival in Lower-Grade Glioma
    Zhang, Mingwei
    Wang, Xuezhen
    Chen, Xiaoping
    Zhang, Qiuyu
    Hong, Jinsheng
    FRONTIERS IN GENETICS, 2020, 11
  • [3] Establishment and Validation of a Ferroptosis-Related lncRNA Signature for Prognosis Prediction in Lower-Grade Glioma
    Huang, Qian-Rong
    Li, Jian-Wen
    Yan, Ping
    Jiang, Qian
    Guo, Fang-Zhou
    Zhao, Yin-Nong
    Mo, Li-Gen
    FRONTIERS IN NEUROLOGY, 2022, 13
  • [4] A Novel Four-Gene Signature Associated With Immune Checkpoint for Predicting Prognosis in Lower-Grade Glioma
    Xiao, Youchao
    Cui, Gang
    Ren, Xingguang
    Hao, Jiaqi
    Zhang, Yu
    Yang, Xin
    Wang, Zhuangzhuang
    Zhu, Xiaolin
    Wang, Huan
    Hao, Chunyan
    Duan, Hubin
    FRONTIERS IN ONCOLOGY, 2020, 10
  • [5] A Novel Mitochondrial-Related Gene Signature for the Tumor Immune Microenvironment Evaluation and Prognosis Prediction in Lung Adenocarcinoma
    Li, Yin-ping
    Liu, Gui-xia
    Wu, Zhan-ling
    Tu, Ping-hua
    Wei, Guang
    Yuan, Man
    Zhong, Min-hua
    Deng, Ke-lan
    JOURNAL OF IMMUNOLOGY RESEARCH, 2022, 2022
  • [6] A Novel TNFSF-Based Signature Predicts the Prognosis and Immunosuppressive Status of Lower-Grade Glioma
    Tao, Rui
    Liu, Qi
    Huang, Ruoyu
    Wang, Kuanyu
    Sun, Zhiyan
    Yang, Pei
    Wang, Jiangfei
    BIOMED RESEARCH INTERNATIONAL, 2022, 2022
  • [7] Prognostic Model and Nomogram Construction Based on a Novel Ferroptosis-Related Gene Signature in Lower-Grade Glioma
    Zhao, Junsheng
    Liu, Zhengtao
    Zheng, Xiaoping
    Gao, Hainv
    Li, Lanjuan
    FRONTIERS IN GENETICS, 2021, 12
  • [8] Prediction of Survival Outcome in Lower-Grade Glioma Using a Prognostic Signature with 33 Immune-Related Gene Pairs
    Chen, Shaohua
    Sun, Yongchu
    Zhu, Xiaodong
    Mo, Zengnan
    INTERNATIONAL JOURNAL OF GENERAL MEDICINE, 2021, 14 : 8149 - 8160
  • [9] Systematic Analysis of a Pyroptosis-Related Signature to Predict the Prognosis and Immune Microenvironment of Lower-Grade Glioma
    He, Yongze
    Cai, Yuxiang
    Liu, Jinsheng
    Ding, Haixia
    Li, Xiang
    Tian, Sufang
    Li, Zhiqiang
    CELLS, 2022, 11 (24)
  • [10] An Immune-Related Signature for Predicting the Prognosis of Lower-Grade Gliomas
    Zhang, Hongbo
    Li, Xuesong
    Li, Yuntao
    Chen, Baodong
    Zong, Zhitao
    Shen, Liang
    FRONTIERS IN IMMUNOLOGY, 2020, 11