Cell-free protein synthesis with technical additives - expanding the parameter space of in vitro gene expression

被引:0
|
作者
Bartsch, Tabea [1 ]
Luetz, Stephan [1 ]
Rosenthal, Katrin [2 ]
机构
[1] TU Dortmund Univ, Dept Biochem & Chem Engn, Lab Ind Chem, Emil Figge Str 66, D-44227 Dortmund, Germany
[2] Constructor Univ, Sch Sci, Campus Ring 6, D-28759 Bremen, Germany
来源
关键词
cell-free protein synthesis; cGAS; Escherichia coli cell-free extract; sfGFP; TX-TL; DEEP EUTECTIC SOLVENTS; SYNTHESIS SYSTEM; COLI; QUANTITATION; VISCOSITIES; CYTOPLASM; DIFFUSION; DENSITIES; PLATFORM; MTBE;
D O I
10.3762/bjoc.20.192
中图分类号
O62 [有机化学];
学科分类号
070303 ; 081704 ;
摘要
Biocatalysis has established itself as a successful tool in organic synthesis. A particularly fast technique for screening enzymes is the in vitro expression or cell-free protein synthesis (CFPS). The system is based on the transcription and translation machinery of an extract-donating organism to which substrates such as nucleotides and amino acids, as well as energy molecules, salts, buffer, etc., are added. After successful protein synthesis, further substrates can be added for an enzyme activity assay. Although mimicking of cell-like conditions is an approach for optimization, the physical and chemical properties of CFPS are not well described yet. To date, standard conditions have mainly been used for CFPS, with little systematic testing of whether conditions closer to intracellular conditions in terms of viscosity, macromolecules, inorganic ions, osmolarity, or water content are advantageous. Also, very few non-physiological conditions have been tested to date that would expand the parameter space in which CFPS can be performed. In this study, the properties of an Escherichia coli extract-based CFPS system are evaluated, and the parameter space is extended to high viscosities, concentrations of inorganic ion and osmolarity using ten different technical additives including organic solvents, polymers, and salts. It is shown that the synthesis of two model proteins, namely superfolder GFP (sfGFP) and the enzyme truncated human cyclic GMP-AMP synthase fused to sfGFP (thscGAS-sfGFP), hs cGAS-sfGFP), is very robust against most of the tested additives.
引用
收藏
页码:2242 / 2253
页数:12
相关论文
共 50 条
  • [1] Gene expression and protein synthesis in cell-free systems.
    Wang, JL
    Gao, PJ
    [J]. PROGRESS IN BIOCHEMISTRY AND BIOPHYSICS, 1998, 25 (05) : 422 - 425
  • [2] Expanding luciferase reporter systems for cell-free protein expression
    Sato, Wakana
    Rasmussen, Melanie
    Deich, Christopher
    Engelhart, Aaron E.
    Adamala, Katarzyna P.
    [J]. SCIENTIFIC REPORTS, 2022, 12 (01)
  • [3] Expanding luciferase reporter systems for cell-free protein expression
    Wakana Sato
    Melanie Rasmussen
    Christopher Deich
    Aaron E. Engelhart
    Katarzyna P. Adamala
    [J]. Scientific Reports, 12
  • [4] Protein Synthesis in Coupled and Uncoupled Cell-Free Prokaryotic Gene Expression Systems
    Hansen, Maike M. K.
    Rosquelles, Marta Ventosa
    Yelleswarapu, Maaruthy
    Maas, Roel J. M.
    van Vugt-Jonker, Aafke J.
    Heus, Hans A.
    Huck, Wilhelm T. S.
    [J]. ACS SYNTHETIC BIOLOGY, 2016, 5 (12): : 1433 - 1440
  • [5] In vitro synthetic biology: Cell-free protein synthesis
    Liu Y.
    Guo X.
    Geng J.
    Jiao Y.
    Han J.
    Zhang Z.
    Zhou X.
    Yang D.
    [J]. Yang, Dayong (dayong.yang@tju.edu.cn), 2017, Chinese Academy of Sciences (62): : 3851 - 3860
  • [6] Protocol for in vitro phospholipid synthesis combining fatty acid synthesis and cell-free gene expression
    Matsumura, Rumie
    Sato, Gaku
    Kuruma, Yutetsu
    [J]. STAR PROTOCOLS, 2024, 5 (02):
  • [7] Cell-free gene expression
    Garenne, David
    Haines, Matthew C.
    Romantseva, Eugenia F.
    Freemont, Paul
    Strychalski, Elizabeth A.
    Noireaux, Vincent
    [J]. NATURE REVIEWS METHODS PRIMERS, 2021, 1 (01):
  • [8] Cell-free gene expression
    [J]. Nature Reviews Methods Primers, 1 (1):
  • [9] Cell-free gene expression
    David Garenne
    Matthew C. Haines
    Eugenia F. Romantseva
    Paul Freemont
    Elizabeth A. Strychalski
    Vincent Noireaux
    [J]. Nature Reviews Methods Primers, 1
  • [10] Expression screening of membrane proteins with cell-free protein synthesis
    Isaksson, Linnea
    Enberg, Johan
    Neutze, Richard
    Karlsson, B. Goran
    Pedersen, Anders
    [J]. PROTEIN EXPRESSION AND PURIFICATION, 2012, 82 (01) : 218 - 225