Genome-scale identification, expression and evolution analysis of B-box members in Dendrobium huoshanense

被引:0
|
作者
Deng, Hui [1 ]
Zhang, Yingyu [2 ,3 ]
Manzoor, Muhammad Aamir [4 ]
Sabir, Irfan Ali [5 ]
Han, Bangxing [1 ]
Song, Cheng [1 ]
机构
[1] West Anhui Univ, Anhui Dabieshan Acad Tradit Chinese Med, Coll Biol & Pharmaceut Engn, Anhui Engn Res Ctr Ecoagr Tradit Chinese Med, Luan 237012, Peoples R China
[2] Henan Univ Sci & Technol, Affiliated Hosp 1, Endocrinol & Metab Ctr, Henan Key Lab Rare Dis, Luoyang 471003, Peoples R China
[3] Henan Univ Sci & Technol, Coll Clin Med, Luoyang 471003, Peoples R China
[4] Shanghai Jiao Tong Univ, Sch Agr & Biol, Dept Plant Sci, Shanghai 201109, Peoples R China
[5] South China Agr Univ, Coll Hort, Key Lab Biol & Genet Improvement Hort Crops, Minist Agr & Rural Affairs,Guangdong Prov Key Lab, Guangzhou 510642, Peoples R China
关键词
GENE DUPLICATION; PROTEIN; TOLERANCE; INSIGHTS; FAMILY;
D O I
10.1016/j.heliyon.2024.e32773
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
B -box (BBX) proteins have been recognized as vital determinants in plant development, morphogenesis, and adaptive responses to a myriad of environmental stresses. These zinc -finger proteins play a pivotal role in various biological processes. Their influence spans photomorphogenesis, the regulation of flowering, and imparting resilience to a wide array of challenges, encompassing both biotic and abiotic factors. Chromosome localization, gene structure and conserved motifs, phylogenetic analysis, collinearity analysis, expression profiling, fluorescence quantitative analysis, and tobacco transient transformation methods were used for functional localization and expression pattern analysis of the DhBBX gene. A total of 23 DhBBX members were identified from Dendrobium huoshanense . Subsequent phylogenetic evaluations effectively segregated these genes into five discrete evolutionary subsets. The predictions of subcellular localizations revealed that all these proteins were localized in the nucleus. The genetic composition and patterns showed that the majority of these genes consisted of several exons, with a few variations that could be attributed to transposon insertion. A comprehensive analysis using q RT-PCR was conducted to unravel the expression patterns of these genes in D. huoshanense , with a specific concentration on their responses to various hormone treatments and cold stress. Subcellular localization reveals that DhBBX21 and DhBBX9 are located in the nucleus. Our results provide a deep comprehension of the complex regulatory mechanisms of BBXs in response to various environmental and hormonal stimuli. These discoveries encourage further detailed and focused investigations into the operational dynamics of the BBX gene family in a wider range of plant species.
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页数:15
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