Bioinformatics Identification and Experimental Validation of a Prognostic Model for the Survival of Lung Squamous Cell Carcinoma Patients

被引:0
|
作者
Zhao, Hongtao [1 ]
Sun, Ruonan [1 ]
Wu, Lei [2 ]
Huang, Peiluo [1 ]
Liu, Wenjing [1 ]
Ma, Qiuhong [3 ]
Liao, Qinyuan [1 ]
Du, Juan [1 ]
机构
[1] Guilin Med Univ, Coll Basic Med, Dept Immunol, Guilin 541199, Guangxi, Peoples R China
[2] Guilin Med Univ, Coll Dept Informat & Lib Sci, Guilin 541004, Peoples R China
[3] Zibo Cent Hosp, Dept Clin Lab, Zibo 255036, Peoples R China
关键词
Cuproptosis; Prognostic signature; LUSC; Immune function; Drug sensitivity; CANCER; CONSTRUCTION; OUTCOMES;
D O I
10.1007/s10528-024-10828-z
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Lung squamous cell carcinoma (LUSC) kills more than four million people yearly. Creating more trustworthy tumor molecular markers for LUSC early detection, diagnosis, prognosis, and customized treatment is essential. Cuproptosis, a novel form of cell death, opened up a new field of study for searching for trustworthy tumor indicators. Our goal was to build a risk model to assess drug sensitivity, monitor immune function, and predict prognosis in LUSC patients. The 19 cuproptosis-related genes were found in the literature, and patient genomic and clinical information was collected using the Cancer Genomic Atlas (TCGA) database. The LUSC patients were grouped using unsupervised clustering techniques, and 7626 differentially expressed genes were identified. Using univariate COX analysis, LASSO regression analysis, and multivariate COX analysis, a prognostic model for LUSC patients was developed. The tumor immune escape was evaluated using the Tumor Immune Dysfunction and Exclusion (TIDE) method. The R packages 'pRRophetic,' 'ggpubr,' and 'ggplot2' were utilized to examine drug sensitivity. For modeling, a 6-cuproptosis-based gene signature was found. Patients with high-risk LUSC had significantly worse survival rates than those with low-risk conditions. The possibility of tumor immunological escape was increased in patients with higher risk scores due to more immune cell inactivation. For patients with high-risk LUSC, we discovered seven potent potential drugs (AZD6482, CHIR.99021, CMK, Embelin, FTI.277, Imatinib, and Pazopanib). In conclusion, the cuproptosis-based genes predictive risk model can be utilized to predict outcomes, track immune function, and evaluate medication sensitivity in LUSC patients.
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页数:31
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