Description of Chryseobacterium fluminis sp. nov., a keratinolytic bacterium isolated from a freshwater river

被引:0
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作者
Kim, Moonsoo [1 ]
Oh, Eun Tak [1 ]
Kim, Seung Bum [1 ]
机构
[1] Chungnam Natl Univ, Coll Biosci & Biotechnol, Dept Microbiol & Mol Biol, 99 Daehak Ro, Daejeon 34134, South Korea
关键词
Chryseobacterium fluminis; Keratin degradation; Lignin degradation; Polyphasic taxonomy; River; RIBOSOMAL-RNA; BIODEGRADATION; SOIL;
D O I
10.1099/ijsem.0.006261
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
A Gram- stain- negative, aerobic, rod- shaped bacterial strain, designated MMS21- Ot14T, was isolated from a freshwater river, and shown to represent a novel species of the genus Chryseobacterium on the basis of the results from a polyphasic approach. The 16S rRNA gene sequence analysis revealed that MMS21- Ot14T represented a member of the genus Chryseobacterium of the family Weeksellaceae and was closely related to Chryseobacterium hagamense RHA2-9T (97.52 % sequence similarity), Chryseobacterium gwangjuense THG A18T (97.46 %) and Chryseobacterium gregarium P 461/12T (97.27 %). The optimal growth of MMS21-Ot14T occurred at 25-30 degrees C, pH 6.0-7.0 and in the absence of NaCl. MMS21- Ot14T was capable of hydrolysing casein, starch, DNA, Tween 20 and tyrosine. The strain also showed keratinolytic activity with keratin azure and decolourising activity with remazol brilliant blue R (RBBR), which indicated potential ability to degrade keratin and lignin. The main polar lipids of MMS21-Ot14T were phosphatidylethanolamine, unidentified aminophospholipids, unidentified aminolipids, an unidentified phospholipid and several unidentified lipids. The predominant fatty acids of MMS21- Ot14Twere iso- C15: 0 and iso- C17: 0 3 - OH, and the major isoprenoid quinone was menaquinone 6 (MK - 6). The whole genome of MMS21- Ot14T was 5 062 016 bp in length with a DNA G+C content of 37.7 %. The average nucleotide identity and digital DNA-DNA hybridisation values between MMS21- Ot14T and phylogenetically related members of the genus Chryseobacterium were well below the threshold values for species delineation. It is evident from the results of this study that MMS21- Ot14T should be classified as representing a novel species of the genus Chryseobacterium, for which the name Chryseobacterium fluminis sp. nov. (type strain, MMS21- Ot14T = KCTC 92255T = LMG 32529T) is proposed.
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