A novel glycoside hydrolase (GH) family 16 multi -domain beta -1,3-1,4-glucanase (FsGlc16A) from Fibrobacter sp. UWP2 was identified, heterogeneously expressed, and its enzymatic properties, protein structure and application potential were characterized. Enzymological characterization showed that FsGlc16A performed the optimal catalytic activity at pH 4.5 and 50 (degrees) C with a specific activity of 3263 U/mg. FsGlc16A exhibited the substrate specificity towards oat beta -glucan, barley beta -glucan and lichenan, and in addition, it hydrolyzed oat beta -glucan and lichenan into different beta -glucooligosaccharides with polymerization degrees of 3 - 4, which further illustrated that it belonged to the endo-type beta -1,3-1,4-glucanase. FsGlc16A was classified in subfamily25 of GH16. A 'PXSSSS ' repeats domain was identified at the C -terminus of FsGlc16A, which was distinct from the typical GH family 16 beta -1,3-1,4-glucanases. Removing the 'PXSSSS ' repeats domain affected the binding of the substrate to FsGlc16A and reduced the enzyme activity. FsGlc16A displayed good potential for the applications, which hydrolyzed oat bran into beta -glucooligosaccharides, and reduced filtration time (18.89 %) and viscosity (3.64 %) in the saccharification process. This study investigated the enzymatic properties and domain function of FsGlc16A, providing new ideas and insights into the study of beta -1,3-1,4-glucanase.