Achromobacter seleniivolatilans sp. nov. and Buttiauxella selenatireducens sp. nov., isolated from the rhizosphere of selenium hyperaccumulator Cardamine hupingshanesis

被引:0
|
作者
Zhang, Sasa [1 ,2 ]
Liu, Yi [1 ,2 ]
Wang, Hao [3 ]
Xu, Zhongnan [1 ,2 ]
Peng, Jing [1 ,2 ]
Xu, Qiaolin [1 ,2 ]
Li, Kui [1 ,2 ]
Wang, Haoyang [1 ,2 ]
Guo, Yanbin [1 ,2 ]
机构
[1] China Agr Univ, Coll Resources & Environm Sci, Beijing 100193, Peoples R China
[2] China Agr Univ, Beijing Key Lab Biodivers & Organ Farming, Beijing 100193, Peoples R China
[3] CALTECH, Div Biol & Biol Engn, Pasadena, CA 91125 USA
关键词
Burkholderiales; Enterobacterales; rhizosphere bacteria; selenium volatilization; selenate reduction; ASTRAGALUS-BISULCATUS; XYLOSOXIDANS; PERFORMANCE; PHYTASE; ROOT; IDENTIFICATION; DIGESTIBILITY; EVOLUTIONARY; INFECTION; REVEALS;
D O I
10.1099/ijsem.0.006334
中图分类号
Q93 [微生物学];
学科分类号
071005 ; 100705 ;
摘要
Two Gram- stain- negative bacterial strains, R39 T and R73 T , were isolated from the rhizosphere soil of the selenium hyperaccumulator Cardamine hupingshanesis in China. Strain R39 T transformed selenite into elemental and volatile selenium, whereas strain R73 T transformed both selenate and selenite into elemental selenium. Phylogenetic and phylogenomic analyses indicated that strain R39 T belonged to the genus Achromobacter , while strain R73 T belonged to the genus Buttiauxella . Strain R39 T (genome size, 6.68 Mb; G+C content, 61.6 mol%) showed the closest relationship to Achromobacter marplatensis LMG 26219 T and Achromobacter kerstersii LMG 3441 T , with average nucleotide identity (ANI) values of 83.6 and 83.4 %, respectively. Strain R73 T (genome size, 5.22 Mb; G+C content, 50.3 mol%) was most closely related to Buttiauxella ferragutiae ATCC 51602 T with an ANI value of 86.4 %. Furthermore, strain A111 from the GenBank database was found to cluster with strain R73 T within the genus Buttiauxella through phylogenomic analyses. The ANI and digital DNA-DNA hybridization values between strains R73 T and A111 were 97.5 and 80.0% respectively, indicating that they belong to the same species. Phenotypic characteristics also differentiated strain R39 T and strain R73 T from their closely related species. Based on the polyphasic analyses, strain R39 T and strain R73 T represent novel species of the genera Achromobacter and Buttiauxella , respectively, for which the names Achromobacter seleniivolatilans sp. nov. (type strain R39 T =GDMCC 1.3843 T =JCM 36009 T ) and Buttiauxella selenatireducens sp. nov. (type strain R73 T =GDMCC 1.3636 T =JCM 35850 T ) are proposed.
引用
收藏
页数:10
相关论文
共 50 条
  • [1] Paenibacillus agilis sp. nov., Paenibacillus cremeus sp. nov. and Paenibacillus terricola sp. nov., isolated from rhizosphere soils
    Kim, Jiyoun
    Chhetri, Geeta
    Kim, Inhyup
    So, Yoonseop
    Seo, Taegun
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2022, 72 (12)
  • [2] Chryseobacterium zeae sp. nov., Chryseobacterium arachidis sp. nov., and Chryseobacterium geocarposphaerae sp. nov. isolated from the rhizosphere environment
    Peter Kämpfer
    John A. McInroy
    Stefanie P. Glaeser
    [J]. Antonie van Leeuwenhoek, 2014, 105 : 491 - 500
  • [3] Achromobacter panacis sp. nov., isolated from rhizosphere of Panax ginseng
    Priyanka Singh
    Yeon Ju Kim
    Hina Singh
    Mohamed El-Agamy Farh
    Deok-Chun Yang
    [J]. Journal of Microbiology, 2017, 55 : 428 - 434
  • [4] Lactobacillus jixianensis sp. nov., Lactobacillus baoqingensis sp. nov., Lactobacillus jiayinensis sp. nov., Lactobacillus zhaoyuanensis sp. nov., Lactobacillus lindianensis sp. nov., Lactobacillus huananensis sp. nov., Lactobacillus tangyuanensis sp. nov., Lactobacillus fuyuanensis sp. nov., Lactobacillus tongjiangensis sp. nov., Lactobacillus fujinensis sp. nov. and Lactobacillus mulengensis sp. nov., isolated from Chinese traditional pickle
    Long, Guang Yun
    Gu, Chun Tao
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2019, 69 (08) : 2340 - 2353
  • [5] Undibacterium baiyunense sp. nov., Undibacterium curvum sp. nov., Undibacterium fentianense sp. nov., Undibacterium flavidum sp. nov., Undibacterium griseum sp. nov., Undibacterium hunanense sp. nov., Undibacterium luofuense sp. nov., Undibacterium nitidum sp. nov., Undibacterium rivi sp. nov., Undibacterium rugosum sp. nov. and Undibacterium umbellatum sp. nov., isolated from streams in China
    Lu, Huibin
    Liu, Fei
    Deng, Tongchu
    Xu, Meiying
    [J]. INTERNATIONAL JOURNAL OF SYSTEMATIC AND EVOLUTIONARY MICROBIOLOGY, 2021, 71 (10)
  • [6] Neoroseomonas alba sp. nov., Neoroseomonas nitratireducens sp. nov., Paraoseomonas indoligenes sp. nov and Paraoseomonas baculiformis sp. nov., isolated from the rhizosphere of paddy soil
    Yoonseop So
    Geeta Chhetri
    Inhyup Kim
    Jiyoun Kim
    Sunho Park
    Yonghee Jung
    Taegun Seo
    [J]. Antonie van Leeuwenhoek, 2023, 116 : 1009 - 1022
  • [7] Neoroseomonas alba sp. nov., Neoroseomonas nitratireducens sp. nov., Paraoseomonas indoligenes sp. nov and Paraoseomonas baculiformis sp. nov., isolated from the rhizosphere of paddy soil
    So, Yoonseop
    Chhetri, Geeta
    Kim, Inhyup
    Kim, Jiyoun
    Park, Sunho
    Jung, Yonghee
    Seo, Taegun
    [J]. ANTONIE VAN LEEUWENHOEK INTERNATIONAL JOURNAL OF GENERAL AND MOLECULAR MICROBIOLOGY, 2023, 116 (10): : 1009 - 1022
  • [8] Lederbergia citri sp. nov., and Lederbergia citrisecundus sp. nov., isolated from citrus rhizosphere
    Liu, Guo-Hong
    Rao, Manik Prabhu Narsing
    Chen, Qian-Qian
    Che, Jian-Mei
    Shi, Huai
    Liu, Bo
    Li, Wen-Jun
    [J]. CURRENT MICROBIOLOGY, 2022, 79 (02)
  • [9] Lysobacter fragariae sp. nov. and Lysobacterrhizosphaerae sp. nov. isolated from rhizosphere of strawberry plant
    Hina Singh
    Juan Du
    Hien T. T. Ngo
    KyungHwa Won
    Jung-Eun Yang
    Ki-Young Kim
    Tae-Hoo Yi
    [J]. Antonie van Leeuwenhoek, 2015, 107 : 1437 - 1444
  • [10] Lederbergia citri sp. nov., and Lederbergia citrisecundus sp. nov., isolated from citrus rhizosphere
    Guo-Hong Liu
    Manik Prabhu Narsing Rao
    Qian-Qian Chen
    Jian-Mei Che
    Huai Shi
    Bo Liu
    Wen-Jun Li
    [J]. Current Microbiology, 2022, 79