Single-molecule fluorescence imaging of DNA maintenance protein binding dynamics and activities on extended DNA

被引:1
|
作者
Irvin, Elizabeth Marie [1 ]
Wang, Hong [1 ,2 ,3 ]
机构
[1] North Carolina State Univ, Toxicol Program, Raleigh, NC 27695 USA
[2] North Carolina State Univ, Phys Dept, Raleigh, NC 27695 USA
[3] North Carolina State Univ, Ctr Human Hlth & Environm, Raleigh, NC 27695 USA
基金
美国国家卫生研究院;
关键词
CURTAINS;
D O I
10.1016/j.sbi.2024.102863
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Defining the molecular mechanisms by which genome maintenance proteins dynamically associate with and process DNA is essential to understand the potential avenues by which these stabilizing mechanisms are disrupted. Single-molecule fluorescence imaging (SMFI) of protein dynamics on extended DNA has greatly expanded our ability to accomplish this, as it captures singular biomolecular interactions - in all their complexity and diversity - without relying on ensembleaveraging of bulk protein activity as most traditional biochemical techniques must do. In this review, we discuss how SMFI studies with extended DNA have substantially contributed to genome stability research over the past two years.
引用
收藏
页数:8
相关论文
共 50 条
  • [1] Conformational change dynamics of DNA and protein studied by single-molecule fluorescence spectroscopy
    Choi, Jungkweon
    Majima, Tetsuro
    Kobunshi, 2011, 60 (02) : 70 - 73
  • [2] DNA hybridisation kinetics using single-molecule fluorescence imaging
    Andrews, Rebecca
    BIOCHEMISTRY: ONE MOLECULE AT A TIME, 2021, 65 (01): : 27 - 36
  • [3] DNA Garden: A Simple Method for Producing Arrays of Stretchable DNA for Single-Molecule Fluorescence Imaging of DNA-Binding Proteins
    Igarashi, Chihiro
    Murata, Agato
    Itoh, Yuji
    Rendra, Dwiky
    Subekti, Graha
    Takahashi, Satoshi
    Kamagata, Kiyoto
    BULLETIN OF THE CHEMICAL SOCIETY OF JAPAN, 2017, 90 (01) : 34 - 43
  • [4] DNA Dynamics and Single-Molecule Biology
    Duzdevich, Daniel
    Redding, Sy
    Greene, Eric C.
    CHEMICAL REVIEWS, 2014, 114 (06) : 3072 - 3086
  • [5] DNA Manipulation and Single-Molecule Imaging
    Takahashi, Shunsuke
    Oshige, Masahiko
    Katsura, Shinji
    MOLECULES, 2021, 26 (04):
  • [6] The dynamics of single-molecule DNA in flow
    Shaqfeh, ESG
    JOURNAL OF NON-NEWTONIAN FLUID MECHANICS, 2005, 130 (01) : 1 - 28
  • [7] DNA-Templated Protein Arrays for Single-Molecule Imaging
    Selmi, Daniele N.
    Adamson, Roslin J.
    Attrill, Helen
    Goddard, Alan D.
    Gilbert, Robert J. C.
    Watts, Anthony
    Turberfield, Andrew J.
    NANO LETTERS, 2011, 11 (02) : 657 - 660
  • [8] Single-Molecule Fluorescence Imaging of DNA at a Potential-Controlled Interface
    Peterson, Eric M.
    Harris, Joel M.
    LANGMUIR, 2013, 29 (26) : 8292 - 8301
  • [9] Super-resolution single-molecule fluorescence imaging of DNA hybridization
    Peterson, Eric
    Harris, Joel
    ABSTRACTS OF PAPERS OF THE AMERICAN CHEMICAL SOCIETY, 2016, 251
  • [10] Single-molecule fluorescence studies on DNA looping
    Jeong, Jiyoun
    Le, Tung T.
    Kim, Harold D.
    METHODS, 2016, 105 : 34 - 43