Chromatin accessibility and transcriptional landscape in PK-15 cells during early exposure to Aflatoxin B1

被引:0
|
作者
Li, Congcong [1 ,4 ,5 ]
Liu, Xiangdong [2 ,3 ]
Liu, Jiaxin [1 ]
Zhang, Xuanxuan [1 ]
Wu, Jiao [1 ]
Ji, Xiangbo [1 ,6 ]
Niu, Hui [1 ]
Xu, Qiuliang [1 ,4 ,5 ]
机构
[1] Henan Univ Anim Husb & Econ, Coll Anim Sci & Technol, 6 Longzi North Rd, Zhengzhou 450046, Henan, Peoples R China
[2] Huazhong Agr Univ, Key Lab Agr Anim Genet Breeding & Reprod, Minist Educ, Wuhan, Peoples R China
[3] Huazhong Agr Univ, Key Lab Swine Genet & Breeding, Minist Agr & Rural Affairs, Wuhan, Peoples R China
[4] Henan Pig Biobreeding Res Inst, Zhengzhou, Henan, Peoples R China
[5] Henan Livestock & Poultry Genet Resources Protect, Zhengzhou, Peoples R China
[6] Henan Univ Anim Husb & Econ, Henan Key Lab Unconvent Feed Resources Innovat Uti, Zhengzhou, Henan, Peoples R China
基金
中国国家自然科学基金;
关键词
Nephrotoxicity; ATAC-Seq; RNA-Seq; Signaling pathways; Transcription factors; Aflatoxin B1; OXIDATIVE STRESS; DNA-DAMAGE; ZINC; APOPTOSIS; LEVEL; RAT; REGULATOR; HEALTH; B-1;
D O I
10.1016/j.bbrc.2024.150394
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
Aflatoxin B1 1 (AFB1) 1 ) not only causes significant losses in livestock production but also poses a serious threat to human health. It is the most carcinogenic among known chemicals. Pigs are more susceptible to AFB1 1 and experience a higher incidence. However, the molecular mechanism of the toxic effect of AFB1 1 remains unclear. In this study, we used assay for transposase-accessible chromatin using sequencing (ATAC-seq) and RNA-seq to uncover chromatin accessibility and gene expression dynamics in PK-15 cells during early exposure to AFB1. 1 . We observed that the toxic effects of AFB1 1 involve signaling pathways such as p53, PI3K-AKT, Hippo, MAPK, TLRs, apoptosis, autophagy, and cancer pathways. Basic leucine zipper (bZIP) transcription factors (TFs), including AP- 1, Fos, JunB, and Fra2, play a crucial role in regulating the biological processes involved in AFB1 1 challenge. Several new TFs, such as BORIS, HNF1b, Atf1, and KNRNPH2, represent potential targets for the toxic mechanism of AFB1. 1 . In addition, it is crucial to focus on the concentration of intracellular zinc ions. These findings will contribute to a better understanding of the mechanisms underlying AFB1-induced 1-induced nephrotoxicity and offer new molecular targets.
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页数:14
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