Modular CRISPR/Cas12a synergistic activation platform for detection and logic operations

被引:0
|
作者
Hu, Minghao [1 ,2 ]
Cheng, Xianzhi [1 ]
Wu, Tongbo [1 ]
机构
[1] Huazhong Univ Sci & Technol, Tongji Med Coll, Sch Pharm, Wuhan 430030, Peoples R China
[2] Huazhong Univ Sci & Technol, Tongji Med Coll, Tongji Hosp, Dept Oncol, Wuhan 430030, Peoples R China
基金
中国国家自然科学基金;
关键词
TRANS-CLEAVAGE; DNA;
D O I
10.1093/nar/gkae470
中图分类号
Q5 [生物化学]; Q7 [分子生物学];
学科分类号
071010 ; 081704 ;
摘要
The revolutionary technology of CRISPR/Cas has reshaped the landscape of molecular biology and molecular engineering. This tool is of interest to researchers in multiple fields, including molecular diagnostics, molecular biochemistry circuits, and information storage. As CRISPR/Cas spreads to more niche areas, new application scenarios and requirements emerge. Developing programmability and compatibility of CRISPR/Cas becomes a critical issue in the new phase. Here, we report a redundancy-based modular CRISPR/Cas12a synergistic activation platform (MCSAP). The position, length, and concentration of the redundancy in the split DNA activators can finely regulate the activity of Cas12a. With the redundant structure as an interface, MCSAP serves as a modular plug-in to seamlessly integrate with the upstream molecular network. MCSAP successfully performs three different tasks: nucleic acid detection, enzyme detection, and logic operation. MCSAP can work as an effector for different molecular networks because of its compatibility and programmability. Our platform provides powerful yet easy-to-use tools and strategies for the fields of DNA nanotechnology, molecular engineering, and molecular biology. Graphical Abstract
引用
收藏
页码:7384 / 7396
页数:13
相关论文
共 50 条
  • [1] An optimized microRNA detection platform based on PAM formation-regulated CRISPR/Cas12a activation
    Li, Dawei
    Liang, Pengda
    Ling, Shen
    Wu, Yapeng
    Lv, Bei
    INTERNATIONAL JOURNAL OF BIOLOGICAL MACROMOLECULES, 2024, 266
  • [2] AND Logic-Gate-Based CRISPR/Cas12a Biosensing Platform for the Sensitive Colorimetric Detection of Dual miRNAs
    Gong, Shaohua
    Wang, Xi
    Zhou, Ping
    Pan, Wei
    Li, Na
    Tang, Bo
    ANALYTICAL CHEMISTRY, 2022, : 15839 - 15846
  • [3] CRISPR-ENHANCE: An enhanced nucleic acid detection platform using Cas12a
    Nguyen, Long T.
    Gurijala, Jeevan
    Rananaware, Santosh R.
    Pizzano, Brianna L. M.
    Stone, Brandon T.
    Jain, Piyush K.
    METHODS, 2022, 203 : 116 - 124
  • [4] Application of CRISPR/Cas12a in the rapid detection of pathogens
    Wang, Yiheng
    Yang, Tianmu
    Liu, Guifang
    Xie, Longfei
    Guo, Jianying
    Xiong, Wenguang
    CLINICA CHIMICA ACTA, 2023, 548
  • [5] Rapid and sensitive exosome detection with CRISPR/Cas12a
    Zhao, Xianxian
    Zhang, Wenqing
    Qiu, Xiaopei
    Mei, Qiang
    Luo, Yang
    Fu, Weiling
    ANALYTICAL AND BIOANALYTICAL CHEMISTRY, 2020, 412 (03) : 601 - 609
  • [6] Rapid and sensitive exosome detection with CRISPR/Cas12a
    Xianxian Zhao
    Wenqing Zhang
    Xiaopei Qiu
    Qiang Mei
    Yang Luo
    Weiling Fu
    Analytical and Bioanalytical Chemistry, 2020, 412 : 601 - 609
  • [7] Combining CRISPR/Cas12a with isothermal exponential amplification as an ultrasensitive sensing platform for microRNA detection
    Yang, Yixia
    Yang, Jingzhao
    Gong, Feng
    Zuo, Pengfei
    Tan, Zhiyou
    Li, Juanjuan
    Xie, Conghua
    Ji, Xinghu
    Li, Wenhua
    He, Zhike
    SENSORS AND ACTUATORS B-CHEMICAL, 2022, 367
  • [8] Mini crRNA-mediated CRISPR/Cas12a system (MCM-CRISPR/Cas12a) and its application in RNA detection
    Chen, Xiaolong
    Huang, Chaowang
    Zhang, Jing
    Hu, Qiao
    Wang, Dan
    You, Qianyi
    Guo, Yawen
    Chen, Huaping
    Xu, Jing
    Hu, Mingdong
    TALANTA, 2024, 268
  • [9] Integration of logic gates to CRISPR/Cas12a system for rapid and sensitive detection of pathogenic bacterial genes
    Peng, Lei
    Zhou, Jin
    Yin, Lijuan
    Man, Shuli
    Ma, Long
    ANALYTICA CHIMICA ACTA, 2020, 1125 : 162 - 168
  • [10] RNA reporter based CRISPR/Cas12a biosensing platform for sensitive detection of circulating tumor DNA
    Deng, Fei
    Li, Yi
    Sang, Rui
    Zhang, Chengchen
    Hall, Tim
    Yang, Danting
    Goldys, Ewa
    2023 45TH ANNUAL INTERNATIONAL CONFERENCE OF THE IEEE ENGINEERING IN MEDICINE & BIOLOGY SOCIETY, EMBC, 2023,