Identification of a novel prognostic cuproptosis-associated LncRNA signature for predicting prognosis and immunotherapy response in patients with esophageal cancer

被引:0
|
作者
Sun, Xinhai [1 ]
Li, Liming [1 ]
Yang, Xiaojie [2 ]
Ke, Dan [3 ]
Zhong, Qihong [1 ]
Zhu, Yuanchang [4 ]
Yang, Litao [5 ]
Zhang, Zhenyang [1 ]
Lin, Jiangbo [1 ]
机构
[1] Fujian Med Univ, Union Hosp, Fujian Inst Thorac & Cardiac Surg, Dept Thorac Surg, 29 Xinquan Rd, Fuzhou 350001, Peoples R China
[2] Chongqing Med Univ, Affiliated Hosp 3, Dept Thorac Surg, Chongqing, Peoples R China
[3] Mudanjiang Med Univ, Coll life Sci, Heilongjiang Key Lab Tissue Damage & Repair, Mudanjiang, Peoples R China
[4] Fujian Med Univ, Union Hosp, Dept Colorectal Surg, Fuzhou, Peoples R China
[5] Baoji Tradit Chinese Med Hosp, Dept Thorac Surg, Baoji, Shaanxi, Peoples R China
关键词
Esophageal cancer; Cuproptosis; lncRNA; Prognostic signature; UGDH-AS1; EXPRESSION; DISCOVERY; CELL; TOOL;
D O I
10.1016/j.heliyon.2024.e30277
中图分类号
O [数理科学和化学]; P [天文学、地球科学]; Q [生物科学]; N [自然科学总论];
学科分类号
07 ; 0710 ; 09 ;
摘要
Nowadays, effective prognostic models for esophageal cancer (ESCA) are still lacking. Long noncoding RNAs (lncRNAs) are commonly utilized as indicators for diagnosing cancer and forecasting patient outcomes. Cuproptosis is regulated by multiple genes and is crucial to the progression of ESCA. However, it is not yet clear what role the cuproptosis-associated lncRNAs (CuALs) play in ESCA. To tackle this problem, a prognostic signature incorporating three CuALs was created. This signature was constructed by the use of the least absolute shrinkage and selection operator (LASSO) and multivariate Cox regression. Subsequently, the signature effectively stratified ESCA samples into a high -risk group and a low -risk group. Those in the low -risk group demonstrated extended overall survival (OS), as well as increased infiltration of T cells, macrophages, and NK cells, suggesting a potentially enhanced response to immunotherapy. The ROC curve analysis demonstrated that this prognostic signature outperformed conventional clinical factors in predicting patient prognosis (AUC = 0.708). K -M survival analysis and correlation analysis identified UGDH-AS1 (a CuAL) as a protective factor positively associated with patient prognosis. The results of RT-qPCR and wound healing assays indicated that UGDH-AS1 is overexpressed in ESCA and could inhibit cancer cell migration. In general, the prognostic signature of CuALs demonstrated a robust capability in forecasting the immune environment and patient prognosis, highlighting its potential as a tool for enhancing personalized treatment strategies in ESCA.
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页数:17
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