LONG-RANGE FRACTAL CORRELATIONS IN DNA INTRONS AND EXONS

被引:52
|
作者
Voss, Richard F. [1 ]
机构
[1] IBM Corp, Thomas J Watson Res Ctr, Yorktown Hts, NY 10598 USA
关键词
D O I
10.1142/S0218348X94000831
中图分类号
O1 [数学];
学科分类号
0701 ; 070101 ;
摘要
Spectral density and random walk methods of analyzing symbolic sequences, such as DNA bases, are compared. Systematic errors in DNA walk analysis, wide variability between samples, and small ensembles cast doubt on previous conclusion that long-range correlations in DNA occur in non-coding (intron) sequences. A new study of GenBank release 73 annotated features demonstrates that both introns and exons have similar long-range fractal correlations with exponents consistent with previous category averages.
引用
收藏
页码:1 / 6
页数:6
相关论文
共 50 条
  • [1] Compositional segmentation and long-range fractal correlations in DNA sequences
    BernaolaGalvan, P
    RomanRoldan, R
    Oliver, JL
    [J]. PHYSICAL REVIEW E, 1996, 53 (05): : 5181 - 5189
  • [2] LONG-RANGE CORRELATIONS IN DNA
    CHATZIDIMITRIOUDREISMANN, CA
    LARHAMMAR, D
    [J]. NATURE, 1993, 361 (6409) : 212 - 213
  • [3] Long-range fractal correlations in literary corpora
    Montemurro, MA
    Pury, PA
    [J]. FRACTALS-COMPLEX GEOMETRY PATTERNS AND SCALING IN NATURE AND SOCIETY, 2002, 10 (04) : 451 - 461
  • [4] Long-range correlations in the structure of fractal films
    Budaev, V. P.
    Grashin, S. A.
    Karpov, A. V.
    Kraevskii, S. V.
    Khimchenko, L. N.
    [J]. JETP LETTERS, 2012, 95 (02) : 78 - 84
  • [5] Long-range correlations in the structure of fractal films
    V. P. Budaev
    S. A. Grashin
    A. V. Karpov
    S. V. Kraevskii
    L. N. Khimchenko
    [J]. JETP Letters, 2012, 95 : 78 - 84
  • [6] Long-range (fractal) correlations in the LEDA database
    DiNella, H
    Montuori, M
    Paturel, G
    Pietronero, L
    Labini, FS
    [J]. ASTRONOMY & ASTROPHYSICS, 1996, 308 (03): : L33 - L36
  • [7] INTRONS ORDER AND LONG-RANGE CORRELATIONS IN NUCLEOTIDE-SEQUENCES
    KAPITONOV, VV
    TITOV, II
    [J]. DOKLADY AKADEMII NAUK, 1994, 337 (06) : 810 - 812
  • [8] LONG-RANGE CORRELATIONS WITHIN DNA
    MADDOX, J
    [J]. NATURE, 1992, 358 (6382) : 103 - 103
  • [9] Segmentation of time series with long-range fractal correlations
    Bernaola-Galvan, P.
    Oliver, J. L.
    Hackenberg, M.
    Coronado, A. V.
    Ivanov, P. Ch.
    Carpena, P.
    [J]. EUROPEAN PHYSICAL JOURNAL B, 2012, 85 (06):
  • [10] Segmentation of time series with long-range fractal correlations
    P. Bernaola-Galván
    J. L. Oliver
    M. Hackenberg
    A. V. Coronado
    P. Ch. Ivanov
    P. Carpena
    [J]. The European Physical Journal B, 2012, 85