Data standardization of plant-pollinator interactions

被引：0

作者：

Salim, Jose A. ^{[1
]}

Saraiva, Antonio M. ^{[1
]}

Zermoglio, Paula F. ^{[2
]}

Agostini, Kayna ^{[3
]}

Wolowski, Marina ^{[4
]}

Drucker, Debora P. ^{[5
]}

Soares, Filipi M. ^{[1
]}

Bergamo, Pedro J. ^{[6
]}

Varassin, Isabela G. ^{[7
]}

Freitas, Leandro ^{[6
]}

Maues, Marcia M. ^{[8
]}

Rech, Andre R. ^{[9
]}

Veiga, Allan K. ^{[1
]}

Acosta, Andre L. ^{[10
]}

Araujo, Andrea C. ^{[11
]}

Nogueira, Anselmo ^{[12
]}

Blochtein, Betina ^{[13
]}

Freitas, Breno M. ^{[15
]}

Albertini, Bruno C. ^{[1
]}

Maia-Silva, Camila ^{[16
]}

Nunes, Carlos E. P. ^{[17
]}

Pires, Carmen S. S. ^{[18
]}

dos Santos, Charles F. ^{[13
]}

Queiroz, Elisa P. ^{[14
]}

Cartolano, Etienne A. ^{[1
]}

de Oliveira, Favizia F. ^{[19
]}

Amorim, Felipe W. ^{[20
]}

Fonturbel, Francisco E. ^{[21
]}

da Silva, Gleycon, V ^{[22
]}

Consolaro, Helder ^{[23
]}

Alves-dos-Santos, Isabel ^{[14
]}

Machado, Isabel C. ^{[24
]}

Silva, Juliana S. ^{[25
]}

Aleixo, Katia P. ^{[26
]}

Carvalheiro, Luisa G. ^{[27
,28
]}

Rocca, Marcia A. ^{[29
]}

Pinheiro, Mardiore ^{[30
]}

Hrncir, Michael ^{[31
]}

Streher, Nathalia S. ^{[32
]}

Ferreira, Patricia A. ^{[33
]}

de Albuquerque, Patricia M. C. ^{[34
]}

Maruyama, Pietro K. ^{[35
]}

Borges, Rafael C. ^{[10
]}

Giannini, Tereza C. ^{[10
]}

Brito, Vinicius L. G. ^{[36
]}

机构：

[1] Univ Sao Paulo, Escola Politecn, BR-05508010 Sao Paulo, SP, Brazil

[2] Univ Buenos Aires, Fac Ciencias Exactas & Nat, Inst IEGEBA, Dept Ecol Genet & Evoluc,CONICET,UBA, Buenos Aires, DF, Argentina

[3] Univ Fed Sao Carlos, Dept Ciencias Nat Matemat & Educ, Rodovia Anhanguera Km 174,Caixa Postal 153, BR-13600970 Araras, SP, Brazil

[4] Univ Fed Alfenas, Inst Ciencias Nat, Rua Gabriel Monteiro Da Silva 700, BR-37130001 Alfenas, MG, Brazil

[5] Empresa Brasileira Pesquisa Agr Embrapa, Embrapa Agr Digital, Campinas, SP, Brazil

[6] Inst Pesquisas Jardim Bot Rio de Janeiro, R Pacheco Leao 915, BR-22460030 Rio De Janeiro, RJ, Brazil

[7] Univ Fed Parana, Dept Bot, Curitiba, Parana, Brazil

[8] Embrapa Amazonia Oriental, Lab Entomol, Trav Dr Eneas Pinheiro S-N, BR-66095903 Belem, Para, Brazil

[9] Univ Fed Vales Jequitinhonha & Mucuri, Fac Interdisciplinar Hurnanidades, Ctr Multiusuario Pesquisa Ciencia Florestal MULTI, BR-39100000 Diamantina, MG, Brazil

[10] Inst Tecnol Vale, Rua Boaventura Silva 955, BR-66055900 Belem, Para, Brazil

[11] Univ Fed Mato Grosso Do Sul, Inst Biociencias, Campo Grande, MS, Brazil

[12] Univ Fed ABC, Lab Interagoes Plant Anim LIPA, Ctr Ciencias Nat & Humanas CCNH, Alameda Univ S-N, Sao Bernardo Do Campo, SP, Brazil

[13] Pontiffcia Univ Catolica Rio Grande Do Sul, Escola Ciencias Sauda & Vida, BR-90619900 Porto Alegre, RS, Brazil

[14] Univ Sao Paulo, Inst Biociencias, Dept Ecol, Sao Paulo, Brazil

[15] Univ Fed Ceara, Dept Zootecnia, Ctr Ciencias Agr, Campus Univ Pici, Fortaleza, Ceara, Brazil

[16] Univ Fed Rural Semi Arido, Dept Biociencias, Av Francisco Mote 572, BR-59625900 Mossoro, RN, Brazil

[17] Univ Stirling, Dept Biol & Environm Sci, Cottrell Bldg, Stirling FK9 4LA, Scotland

[18] Embrapa Recursos Genet & Biotecnol, Brasilia, DF, Brazil

[19] Univ Fed Bahia, Inst Biol IBIO, Lab Bion Biogeog & Sistemat Insetos BIOSIS, BR-40170115 Salvador, BA, Brazil

[20] Univ Estadual Paulista, Inst Biociencias, Lab Ecol Polinizagio & Interacoes LEPI, Programa Posgrad Bot,Programa Posgrad Zool, Botucatu, SP, Brazil

[21] Pontificia Univ Catolica Valparaiso, Inst Biol, Fac Ciencias, Valparaiso, Chile

[22] Inst Nacl de Pesquisas da Amazonia, Programa Posgrad Ecol, INPA V8, Av Andre Araujo 2936, BR-69067375 Manaus, Amazonas, Brazil

[23] Univ Fed Catalao, Inst Biotecnol, Catalao, Go, Brazil

[24] Univ Fed Pernambuco, Dept Bot, Programa Posgrad Biol Vegetal, BR-50670901 Recife, PE, Brazil

[25] Inst Fed Educ Ciencia & Tecnol Mato Grosso, Ave Sen Filinto Muller 953, BR-78043400 Cuiaba, MT, Brazil

[26] Assoc Brasileira Estudos Abelhas ABELHA, BR-04535001 Sao Paulo, SP, Brazil

[27] Univ Fed Goias, Dept Ecol, Campus Samambaia, Goiania, Go, Brazil

[28] Univ Lisbon, Ctr Ecol Evolut & Environm Changes cE3c, Lisbon, Portugal

[29] Univ Fed Sergipe, Dept Ecol, Ctr Ciencias Biol & Saude, Ave Marechal Rondon S-N, BR-49100 WO Sao Cristovao, Sergipe, Brazil

[30] Univ Fed Fronteira Sul, R Major Antonio Cardoso 590, BR-97900000 Cerro Largo, RS, Brazil

[31] Univ Sao Paulo, Inst Biociencias, Dept Fisiol, Rua Matao 321,Travessa 14, BR-05508900 Sao Paulo, SP, Brazil

[32] Univ Pittsburgh, Dept Biol Sci, Pittsburgh, PA 15260 USA

[33] Univ Fed Sao Carlos, Environm Sci Dept, Sao Paulo, Brazil

[34] Univ Fed Maranhao, Dept Biol, Sao Luis, Maranhao, Brazil

[35] Univ Fed Minas Gerais, Inst Ciencias Biol, Ctr Sinease Ecol & Conservacao, Dept Genet Ecol & Evolucao, Belo Horizonte, MG, Brazil

[36] Univ Fed Uberlandia, Inst Biol, Rua Ceara SN, BR-38405302 Uberlandia, MG, Brazil

来源：

GIGASCIENCE | 2022年 / 11卷

基金：

英国自然环境研究理事会; 巴西圣保罗研究基金会;

关键词：

biodiversity information; Darwin Core; vocabulary of terms; pollination; pollinator; biodiversity informatics;

D O I：

暂无

中图分类号：

Q [生物科学];

学科分类号：

07 ; 0710 ; 09 ;

摘要：

Background Animal pollination is an important ecosystem function and service, ensuring both the integrity of natural systems and human well-being. Although many knowledge shortfalls remain, some high-quality data sets on biological interactions are now available. The development and adoption of standards for biodiversity data and metadata has promoted great advances in biological data sharing and aggregation, supporting large-scale studies and science-based public policies. However, these standards are currently not suitable to fully support interaction data sharing. Results Here we present a vocabulary of terms and a data model for sharing plant-pollinator interactions data based on the Darwin Core standard. The vocabulary introduces 48 new terms targeting several aspects of plant-pollinator interactions and can be used to capture information from different approaches and scales. Additionally, we provide solutions for data serialization using RDF, XML, and DwC-Archives and recommendations of existing controlled vocabularies for some of the terms. Our contribution supports open access to standardized data on plant-pollinator interactions. Conclusions The adoption of the vocabulary would facilitate data sharing to support studies ranging from the spatial and temporal distribution of interactions to the taxonomic, phenological, functional, and phylogenetic aspects of plant-pollinator interactions. We expect to fill data and knowledge gaps, thus further enabling scientific research on the ecology and evolution of plant-pollinator communities, biodiversity conservation, ecosystem services, and the development of public policies. The proposed data model is flexible and can be adapted for sharing other types of interactions data by developing discipline-specific vocabularies of terms.

引用

页数：15

共 50 条

[1] Data standardization of plant-pollinator interactions
Salim, Jose A.
Saraiva, Antonio M.
Zermoglio, Paula F.
Agostini, Kayna
Wolowski, Marina
Drucker, Debora P.
Soares, Filipi M.
Bergamo, Pedro J.
Varassin, Isabela G.
Freitas, Leandro
Maues, Marcia M.
Rech, Andre R.
Veiga, Allan K.
Acosta, Andre L.
Araujo, Andrea C.
Nogueira, Anselmo
Blochtein, Betina
Freitas, Breno M.
Albertini, Bruno C.
Maia-Silva, Camila
Nunes, Carlos E. P.
Pires, Carmen S. S.
dos Santos, Charles F.
Queiroz, Elisa P.
Cartolano, Etienne A.
de Oliveira, Favizia F.
Amorim, Felipe W.
Fonturbel, Francisco E.
da Silva, Gleycon, V
Consolaro, Helder
Alves-dos-Santos, Isabel
Machado, Isabel C.
Silva, Juliana S.
Aleixo, Katia P.
Carvalheiro, Luisa G.
Rocca, Marcia A.
Pinheiro, Mardiore
Hrncir, Michael
Streher, Nathalia S.
Ferreira, Patricia A.
de Albuquerque, Patricia M. C.
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Borges, Rafael C.
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