Coarse-graining the Dynamics of Ideal Branched Polymers

被引：0

作者：

Danos, Vincent ^{[1
]}

Honorato-Zimmer, Ricardo ^{[2
]}

Jaramillo-Riveri, Sebastian ^{[3
]}

Stucki, Sandro ^{[4
]}

机构：

[1] Univ Edinburgh, Sch Informat, Edinburgh, Midlothian, Scotland

[2] Univ Edinburgh, Informat Life Sci Inst, Edinburgh, Midlothian, Scotland

[3] SynthSys, Edinburgh EH9 3JD, Midlothian, Scotland

[4] Univ Paris 07, PPS Lab, Paris, France

来源：

ELECTRONIC NOTES IN THEORETICAL COMPUTER SCIENCE | 2015年 / 313卷

关键词：

rule-based modelling; fragmentation; coarse-graining; ideal branched polymers;

D O I：

10.1016/j.entcs.2015.04.018

中图分类号：

TP301 [理论、方法];

学科分类号：

081202 ;

摘要：

We define a class of local stochastic rewrite rules on directed site trees. We give a compact presentation of (often countably infinite) coarse-grained differential systems describing the dynamics of these rules in the deterministic limit, and study in a simple case finite approximations based on truncations to a certain size. We show an application to the modelling of the dynamics of sugar polymers.

引用

页码：47 / 64

页数：18

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